RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 SCYL3Q8IZE3 742 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 PPP1R13BQ96KQ4 1090 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 FANCLQ9NW38 375 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 PLCH2O75038 1416 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 MAP3K5Q99683 1374 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 STAM2O75886 525 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 PKP1Q13835 747 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 TMED2Q15363 201 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 ICE2Q659A1 982 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 CYP4F22Q6NT55 531 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 OTUD6AQ7L8S5 288 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 TRIM50Q86XT4 487 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 EYA3Q99504 573 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 DNAJC8O75937 253 aaPredicted RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 PUM3Q15397 648 aaKnown RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 SPATS2Q86XZ4 545 aaKnown RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 GLG1Q92896 1179 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 ZNF653Q96CK0 615 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 BAG5Q9UL15 447 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 DNM3Q9UQ16 869 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 IVNS1ABPQ9Y6Y0 642 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 ANKRD36BQ8N2N9 1353 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 NME8Q8N427 588 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 ZBTB22O15209 634 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 G2E3Q7L622 706 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 XAGE2Q96GT9 111 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 ANGEL1Q9UNK9 670 aaKnown RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 SCINQ9Y6U3 715 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 ZNF318Q5VUA4 2279 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 SKOR1P84550 965 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 GRAMD1BQ3KR37 738 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 RIC8AQ9NPQ8 531 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 SCHIP1Q9P0W5 487 aaPredicted RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 FIS1Q9Y3D6 152 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 MYH6P13533 1939 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 HDLBPQ00341 1268 aaKnown RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 TOM1L1O75674 476 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 PHACTR3Q96KR7 559 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 METTL14Q9HCE5 456 aaKnown RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 THEGQ9P2T0 379 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 DEXIO95424 95 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 DLATP10515 647 aaKnown RBP8.64□□□□□ -1.03
CIITA-201ENST00000324288 DAB2P98082 770 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 SNX1Q13596 522 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 C16orf87Q6PH81 154 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 ATP2A3Q93084 1043 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
CIITA-201ENST00000324288 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 NVLO15381 856 aaKnown RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 AKAP4Q5JQC9 854 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 EEF2KMTQ96G04 330 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 CENPKQ9BS16 269 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 SNX14Q9Y5W7 946 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 IL16Q14005 1332 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 NSD2O96028 1365 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 CLCN6P51797 869 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 PSMC1P62191 440 aaKnown RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 ZBTB41Q5SVQ8 909 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 PARD3BQ8TEW8 1205 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 M0QZ92 97 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 MSH2P43246 934 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 MAML1Q92585 1016 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 HAUS8Q9BT25 410 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 ZNF827Q17R98 1081 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 OR8K1Q8NGG5 319 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 YWHAGP61981 247 aaKnown RBP eCLIP8.63□□□□□ -1.03
CIITA-201ENST00000324288 TTC6Q86TZ1 520 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 LRWD1Q9UFC0 647 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 TRPC6Q9Y210 931 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 H7C0C1 242 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 ATP5OP48047 213 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 RASSF7Q02833 373 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 BRDTQ58F21 947 aaPredicted RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 DIS3L2Q8IYB7 885 aaKnown RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 ZBTB40Q9NUA8 1239 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 SPDYE2BA6NHP3 402 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 SPDYE6P0CI01 402 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 MCUQ8NE86 351 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 PPWD1Q96BP3 646 aaKnown RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 HAUS1Q96CS2 278 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 GNPTABQ3T906 1256 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 TBC1D1Q86TI0 1168 aaPredicted RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 SLC35F6Q8N357 371 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 RAPGEF5Q92565 580 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 ASXL3Q9C0F0 2248 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 GAS7O60861 476 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 MYLK4Q86YV6 388 aaPredicted RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 TEKT1Q969V4 418 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 RAB20Q9NX57 234 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 IRX4P78413 519 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
CIITA-201ENST00000324288 TNNI3KQ59H18 835 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 GPBP1Q86WP2 473 aa8.63□□□□□ -1.03
CIITA-201ENST00000324288 RYBPQ8N488 228 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms