RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 JAKMIP3Q5VZ66 844 aa21.04■□□□□ 0.96
USP39-201ENST00000323701 SDF4Q9BRK5 362 aa21.04■□□□□ 0.96
USP39-201ENST00000323701 GPRC5DQ9NZD1 345 aa21.04■□□□□ 0.96
USP39-201ENST00000323701 KCNH3Q9ULD8 1083 aa21.04■□□□□ 0.96
USP39-201ENST00000323701 FZD1Q9UP38 647 aa21.04■□□□□ 0.96
USP39-201ENST00000323701 TMEM232C9JQI7 657 aa21.03■□□□□ 0.96
USP39-201ENST00000323701 MMP14P50281 582 aa21.03■□□□□ 0.96
USP39-201ENST00000323701 ZYXQ15942 572 aaKnown RBP21.03■□□□□ 0.96
USP39-201ENST00000323701 LONRF3Q496Y0 759 aa21.03■□□□□ 0.96
USP39-201ENST00000323701 EPSTI1Q96J88 318 aa21.03■□□□□ 0.96
USP39-201ENST00000323701 C6orf50Q9HD87 102 aa21.03■□□□□ 0.96
USP39-201ENST00000323701 TMX2Q9Y320 296 aa21.03■□□□□ 0.96
USP39-201ENST00000323701 ANO6Q4KMQ2 910 aa21.03■□□□□ 0.96
USP39-201ENST00000323701 ANGEL2Q5VTE6 544 aaKnown RBP21.03■□□□□ 0.96
USP39-201ENST00000323701 CCDC12Q8WUD4 166 aaPredicted RBP21.03■□□□□ 0.96
USP39-201ENST00000323701 A0A087X0B3 334 aa21.02■□□□□ 0.96
USP39-201ENST00000323701 ESYT2A0FGR8 921 aa21.02■□□□□ 0.96
USP39-201ENST00000323701 EDIL3O43854 480 aa21.02■□□□□ 0.96
USP39-201ENST00000323701 BMP3P12645 472 aa21.02■□□□□ 0.96
USP39-201ENST00000323701 GPC2Q8N158 579 aa21.02■□□□□ 0.96
USP39-201ENST00000323701 TMEM60Q9H2L4 133 aa21.02■□□□□ 0.96
USP39-201ENST00000323701 MORC2Q9Y6X9 1032 aaPredicted RBP21.02■□□□□ 0.96
USP39-201ENST00000323701 DDNO94850 711 aaPredicted RBP21.02■□□□□ 0.95
USP39-201ENST00000323701 GNA11P29992 359 aa21.02■□□□□ 0.95
USP39-201ENST00000323701 TNFAIP1Q13829 316 aa21.02■□□□□ 0.95
USP39-201ENST00000323701 CDC37Q16543 378 aaPredicted RBP21.02■□□□□ 0.95
USP39-201ENST00000323701 UBE2SQ16763 222 aa21.02■□□□□ 0.95
USP39-201ENST00000323701 FAM177A1Q8N128 213 aaPredicted RBP21.02■□□□□ 0.95
USP39-201ENST00000323701 ZNF579Q8NAF0 562 aaKnown RBP21.02■□□□□ 0.95
USP39-201ENST00000323701 VWA3AA6NCI4 1184 aa21.01■□□□□ 0.95
USP39-201ENST00000323701 H7C1D1 291 aa21.01■□□□□ 0.95
USP39-201ENST00000323701 CTAGE5O15320 804 aa21.01■□□□□ 0.95
USP39-201ENST00000323701 FOXN1O15353 648 aa21.01■□□□□ 0.95
USP39-201ENST00000323701 REXO1Q8N1G1 1221 aaKnown RBP21.01■□□□□ 0.95
USP39-201ENST00000323701 DNAJC25Q9H1X3 360 aa21.01■□□□□ 0.95
USP39-201ENST00000323701 ARHGEF10LQ9HCE6 1279 aa21.01■□□□□ 0.95
USP39-201ENST00000323701 SMCHD1A6NHR9 2005 aa21.01■□□□□ 0.95
USP39-201ENST00000323701 hCG_1984214I3L0E3 225 aa21■□□□□ 0.95
USP39-201ENST00000323701 ADCY7P51828 1080 aa21■□□□□ 0.95
USP39-201ENST00000323701 SASS6Q6UVJ0 657 aa21■□□□□ 0.95
USP39-201ENST00000323701 PDILTQ8N807 584 aa21■□□□□ 0.95
USP39-201ENST00000323701 ZNF713Q8N859 430 aaPredicted RBP21■□□□□ 0.95
USP39-201ENST00000323701 DGKZQ13574 1117 aa21■□□□□ 0.95
USP39-201ENST00000323701 FAM83BQ5T0W9 1011 aa21■□□□□ 0.95
USP39-201ENST00000323701 DLK2Q6UY11 383 aa21■□□□□ 0.95
USP39-201ENST00000323701 C11orf57Q6ZUT1 292 aaPredicted RBP21■□□□□ 0.95
USP39-201ENST00000323701 FAM43AQ8N2R8 423 aa21■□□□□ 0.95
USP39-201ENST00000323701 POLR2DO15514 142 aaKnown RBP20.99■□□□□ 0.95
USP39-201ENST00000323701 KRT25Q7Z3Z0 450 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 TBCKQ8TEA7 893 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 SYMPKQ92797 1274 aaKnown RBP20.99■□□□□ 0.95
USP39-201ENST00000323701 RIC8AQ9NPQ8 531 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 KIAA1468Q9P260 1216 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 INPP5BP32019 993 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 IKQ13123 557 aaPredicted RBP20.99■□□□□ 0.95
USP39-201ENST00000323701 NONOQ15233 471 aaKnown RBP eCLIP20.99■□□□□ 0.95
USP39-201ENST00000323701 SYDE2Q5VT97 1194 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 BTNL9Q6UXG8 535 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 LUZP1Q86V48 1076 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 FERMT2Q96AC1 680 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 TIGD1Q96MW7 591 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 RNF181Q9P0P0 153 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.99■□□□□ 0.95
USP39-201ENST00000323701 PCDHA1Q9Y5I3 950 aa20.99■□□□□ 0.95
USP39-201ENST00000323701 ATAD5Q96QE3 1844 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 BMP15O95972 392 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 ASNSP08243 561 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 PNOCQ13519 176 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 LETM2Q2VYF4 491 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 KRBA2Q6ZNG9 492 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 GGA3Q9NZ52 723 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 PRR12Q9ULL5 1215 aa20.98■□□□□ 0.95
USP39-201ENST00000323701 AP5Z1O43299 807 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 CDC25AP30304 524 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 CLK2P49760 499 aaKnown RBP20.97■□□□□ 0.95
USP39-201ENST00000323701 GRAMD1CQ8IYS0 662 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 VCPKMTQ9H867 229 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 CBX8Q9HC52 389 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 SYNPO2Q9UMS6 1093 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L15C9J2P7 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L13C9JLJ4 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L11C9JVI0 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L18D6R9N7 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L22D6RA61 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L17D6RBQ6 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L19D6RCP7 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L20D6RJB6 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 BIN1O00499 593 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 MDM2Q00987 491 aaPredicted RBP20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L24Q0WX57 530 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 USP17L6PQ6QN14 398 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 P2RX7Q99572 595 aaKnown RBP20.97■□□□□ 0.95
USP39-201ENST00000323701 ZNF341Q9BYN7 854 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 FAM13BQ9NYF5 915 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 SERTAD1Q9UHV2 236 aa20.97■□□□□ 0.95
USP39-201ENST00000323701 CCNT1O60563 726 aaKnown RBP20.96■□□□□ 0.95
USP39-201ENST00000323701 USH1GQ495M9 461 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 PPP1R18Q6NYC8 613 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 FAM200AQ8TCP9 573 aa20.96■□□□□ 0.95
USP39-201ENST00000323701 PSTPIP2Q9H939 334 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms