RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 DDR1Q08345 913 aa17.84■□□□□ 0.45
SMARCD2-202ENST00000323347 KARSQ15046 597 aaKnown RBP17.84■□□□□ 0.45
SMARCD2-202ENST00000323347 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
SMARCD2-202ENST00000323347 PPFIBP1Q86W92 1011 aa17.84■□□□□ 0.45
SMARCD2-202ENST00000323347 SMAP1Q8IYB5 467 aaPredicted RBP17.84■□□□□ 0.45
SMARCD2-202ENST00000323347 ADSSL1Q8N142 457 aa17.84■□□□□ 0.45
SMARCD2-202ENST00000323347 C6orf50Q9HD87 102 aa17.84■□□□□ 0.45
SMARCD2-202ENST00000323347 IGKV6D-41A0A0C4DH26 115 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 KLRC4O43908 158 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 MFAP3LO75121 409 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 RBL2Q08999 1139 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 KRT31Q15323 416 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 TOGARAM2Q6ZUX3 1019 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 NELFBQ8WX92 580 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 RRP36Q96EU6 259 aaKnown RBP17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 OGFRQ9NZT2 677 aa17.83■□□□□ 0.44
SMARCD2-202ENST00000323347 QSER1Q2KHR3 1735 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 RHOBTB3O94955 611 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 SNHG28P0DPA3 235 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 NONOQ15233 471 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 CNGA4Q8IV77 575 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 CEP95Q96GE4 821 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 GTPBP4Q9BZE4 634 aaKnown RBP17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 COA1Q9GZY4 146 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 DDX41Q9UJV9 622 aaKnown RBP17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 DAGLAQ9Y4D2 1042 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 MYO3BQ8WXR4 1341 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 MYH1P12882 1939 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 UBA7P41226 1012 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 PRCPP42785 496 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 COPB1P53618 953 aaKnown RBP17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 NAPAP54920 295 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 TRIM14Q14142 442 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 TCP11X2Q5H9J9 407 aa17.82■□□□□ 0.44
SMARCD2-202ENST00000323347 SMCO2A6NFE2 343 aa17.81■□□□□ 0.44
SMARCD2-202ENST00000323347 OR52Z1P0C646 297 aa17.81■□□□□ 0.44
SMARCD2-202ENST00000323347 GOLGA8HP0CJ92 632 aa17.81■□□□□ 0.44
SMARCD2-202ENST00000323347 H2AFXP16104 143 aaPredicted RBP17.81■□□□□ 0.44
SMARCD2-202ENST00000323347 MAP3K9P80192 1104 aa17.81■□□□□ 0.44
SMARCD2-202ENST00000323347 GIMAP8Q8ND71 665 aaPredicted RBP17.81■□□□□ 0.44
SMARCD2-202ENST00000323347 FAM53CQ9NYF3 392 aa17.81■□□□□ 0.44
SMARCD2-202ENST00000323347 GYPCP04921 128 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 CCDC175P0C221 793 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 CDC25AP30304 524 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 ELF2Q15723 593 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 KMT5BQ4FZB7 885 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 USP17L2Q6R6M4 530 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 RASGRP2Q7LDG7 609 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 IRF2BP1Q8IU81 584 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 ANKRD20A12PQ8NF67 263 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 MTMR4Q9NYA4 1195 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 ATP6V0A2Q9Y487 856 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 ADGRG1Q9Y653 693 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 KCNJ18B7U540 433 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 KCNJ12Q14500 433 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 ASPRV1Q53RT3 343 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 COBLL1Q53SF7 1204 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 NEK8Q86SG6 692 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 NOC3LQ8WTT2 800 aaKnown RBP17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 KIFC2Q96AC6 838 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 GDAQ9Y2T3 454 aa17.8■□□□□ 0.44
SMARCD2-202ENST00000323347 PP2D1A8MPX8 630 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 N4BP3O15049 544 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 PDHBP11177 359 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 PPP1R2P41236 205 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 RAD9BQ6WBX8 426 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 LRRC15Q8TF66 581 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 C7orf25Q9BPX7 421 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 THAP9Q9H5L6 903 aa17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
SMARCD2-202ENST00000323347 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 EEF1GP26641 437 aaKnown RBP17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 CASQ1P31415 396 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 CASP14P31944 242 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 FBXO38Q6PIJ6 1188 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 CABP7Q86V35 215 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 TMTC1Q8IUR5 882 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 DHTKD1Q96HY7 919 aaPredicted RBP17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 PIGSQ96S52 555 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 SWAP70Q9UH65 585 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 A0A1W2PQC6 194 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 SOWAHDA6NJG2 315 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 USP17L5A8MUK1 530 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 EFCAB8A8MWE9 144 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 C6orf229H3BNL8 230 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 TADA3O75528 432 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 TPM1P09493 284 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 FXR1P51114 621 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 GNG11P61952 73 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 ERCC6LQ2NKX8 1250 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 LRRN4CLQ8ND94 238 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 WDR24Q96S15 920 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
SMARCD2-202ENST00000323347 URI1O94763 535 aaPredicted RBP17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 GTF2IP78347 998 aa17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 STIM1Q13586 685 aa17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 MTF1Q14872 753 aa17.77■□□□□ 0.44
SMARCD2-202ENST00000323347 PPP1R18Q6NYC8 613 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms