RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
NCL-201ENST00000322723 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 PDHBP11177 359 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 SFPQP23246 707 aaKnown RBP eCLIP13.58□□□□□ -0.24
NCL-201ENST00000322723 NCBP1Q09161 790 aaKnown RBP13.58□□□□□ -0.24
NCL-201ENST00000322723 ZNF658Q5TYW1 1059 aaPredicted RBP13.58□□□□□ -0.24
NCL-201ENST00000322723 KRT222Q8N1A0 295 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 AK8Q96MA6 479 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 CUEDC2Q9H467 287 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 SWAP70Q9UH65 585 aa13.58□□□□□ -0.24
NCL-201ENST00000322723 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
NCL-201ENST00000322723 MTMR9Q96QG7 549 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 PANX2Q96RD6 677 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 MKNK2Q9HBH9 465 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 SYNRGQ9UMZ2 1314 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 VWA3AA6NCI4 1184 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 SPECC1LQ69YQ0 1117 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
NCL-201ENST00000322723 IGSF22Q8N9C0 903 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 MNS1Q8NEH6 495 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 SAMSN1Q9NSI8 373 aaKnown RBP13.57□□□□□ -0.24
NCL-201ENST00000322723 SHMT1P34896 483 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 OGFRQ9NZT2 677 aa13.57□□□□□ -0.24
NCL-201ENST00000322723 KLRF2D3W0D1 207 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 STX10O60499 249 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 ASPRV1Q53RT3 343 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 RASGRP2Q7LDG7 609 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 KRT25Q7Z3Z0 450 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 FER1L6Q2WGJ9 1857 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 ATRNL1Q5VV63 1379 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
NCL-201ENST00000322723 APOBEC3HQ6NTF7 200 aaKnown RBP13.56□□□□□ -0.24
NCL-201ENST00000322723 SAP30BPQ9UHR5 308 aaKnown RBP13.56□□□□□ -0.24
NCL-201ENST00000322723 RHOBTB3O94955 611 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 HDLBPQ00341 1268 aaKnown RBP13.56□□□□□ -0.24
NCL-201ENST00000322723 C10orf67Q8IYJ2 551 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 NLGN1Q8N2Q7 840 aa13.56□□□□□ -0.24
NCL-201ENST00000322723 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 MMTAG2Q9BU76 263 aaKnown RBP13.55□□□□□ -0.24
NCL-201ENST00000322723 FAM53CQ9NYF3 392 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 CCP110O43303 1012 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 PARP1P09874 1014 aaKnown RBP13.55□□□□□ -0.24
NCL-201ENST00000322723 PTPN14Q15678 1187 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 MKL1Q969V6 931 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 CCDC34Q96HJ3 373 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 ZDHHC15Q96MV8 337 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
NCL-201ENST00000322723 MCM7P33993 719 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.241e-8■■■□□ 16
NCL-201ENST00000322723 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
NCL-201ENST00000322723 PDILTQ8N807 584 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 CCDC12Q8WUD4 166 aaPredicted RBP13.55□□□□□ -0.24
NCL-201ENST00000322723 IDI2Q9BXS1 227 aa13.55□□□□□ -0.24
NCL-201ENST00000322723 PARP14Q460N5 1801 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 TRIM37O94972 964 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 SERPINC1P01008 464 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 CASP1P29466 404 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 GIMAP8Q8ND71 665 aaPredicted RBP13.54□□□□□ -0.24
NCL-201ENST00000322723 C7orf43Q8WVR3 580 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 DNAJC18Q9H819 358 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 RMND1Q9NWS8 449 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 RPN1P04843 607 aaKnown RBP13.54□□□□□ -0.24
NCL-201ENST00000322723 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
NCL-201ENST00000322723 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 MBOAT7Q96N66 472 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
NCL-201ENST00000322723 LOXHD1Q8IVV2 1947 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 USP17L5A8MUK1 530 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
NCL-201ENST00000322723 EHHADHQ08426 723 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 CFAP100Q494V2 611 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 CDC42EP5Q6NZY7 148 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 CRYGNQ8WXF5 182 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 MASTLQ96GX5 879 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 NAA15Q9BXJ9 866 aaKnown RBP13.53□□□□□ -0.24
NCL-201ENST00000322723 SLC26A4O43511 780 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 AKR1B1P15121 316 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 ARGLU1Q9NWB6 273 aaPredicted RBP13.53□□□□□ -0.24
NCL-201ENST00000322723 PDE6BP35913 854 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 ZNF507Q8TCN5 953 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 RRP36Q96EU6 259 aaKnown RBP13.53□□□□□ -0.24
NCL-201ENST00000322723 FEZ1Q99689 392 aa13.53□□□□□ -0.24
NCL-201ENST00000322723 COL4A5P29400 1685 aa13.52□□□□□ -0.24
NCL-201ENST00000322723 INF2Q27J81 1249 aa13.52□□□□□ -0.24
NCL-201ENST00000322723 HYIQ5T013 277 aa13.52□□□□□ -0.24
NCL-201ENST00000322723 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.24
NCL-201ENST00000322723 CCDC51Q96ER9 411 aa13.52□□□□□ -0.24
NCL-201ENST00000322723 LOC285556D6RIA3 1793 aa13.52□□□□□ -0.24
NCL-201ENST00000322723 GNA11P29992 359 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms