RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ZBED3Q96IU2 234 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-201ENST00000309469 TRIM5Q9C035 493 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 BIN2Q9UBW5 565 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-201ENST00000309469 F5H6K3 240 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 PPP1R11O60927 126 aaPredicted RBP24.18■■□□□ 1.46
ATG4D-201ENST00000309469 SLFN14P0C7P3 912 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 LONP1P36776 959 aaKnown RBP24.18■■□□□ 1.46
ATG4D-201ENST00000309469 ZNF75DP51815 510 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 ADCY7P51828 1080 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 KLRC3Q07444 240 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 SARM1Q6SZW1 724 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 PLA2G4DQ86XP0 818 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 CCDC34Q96HJ3 373 aa24.18■■□□□ 1.46
ATG4D-201ENST00000309469 LAD1O00515 517 aa24.17■■□□□ 1.46
ATG4D-201ENST00000309469 MYO1BO43795 1136 aa24.17■■□□□ 1.46
ATG4D-201ENST00000309469 TNIP1Q15025 636 aa24.17■■□□□ 1.46
ATG4D-201ENST00000309469 NT5DC1Q5TFE4 455 aa24.17■■□□□ 1.46
ATG4D-201ENST00000309469 JAKMIP3Q5VZ66 844 aa24.17■■□□□ 1.46
ATG4D-201ENST00000309469 BCS1LQ9Y276 419 aa24.17■■□□□ 1.46
ATG4D-201ENST00000309469 MYH4Q9Y623 1939 aa24.17■■□□□ 1.46
ATG4D-201ENST00000309469 PRR29P0C7W0 189 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 DTHD1Q6ZMT9 781 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 NEK8Q86SG6 692 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 FAM83AQ86UY5 434 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 TMEM60Q9H2L4 133 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 TMEM260Q9NX78 707 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.16■■□□□ 1.46
ATG4D-201ENST00000309469 ZKSCAN5Q9Y2L8 839 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 SARSP49591 514 aaKnown RBP24.16■■□□□ 1.46
ATG4D-201ENST00000309469 GRAMD1CQ8IYS0 662 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 GMCL1Q96IK5 515 aa24.16■■□□□ 1.46
ATG4D-201ENST00000309469 LETM2Q2VYF4 491 aa24.15■■□□□ 1.46
ATG4D-201ENST00000309469 TBCKQ8TEA7 893 aa24.15■■□□□ 1.46
ATG4D-201ENST00000309469 SMARCE1Q969G3 411 aa24.15■■□□□ 1.46
ATG4D-201ENST00000309469 PYM1Q9BRP8 204 aaKnown RBP24.15■■□□□ 1.46
ATG4D-201ENST00000309469 MYOZ2Q9NPC6 264 aa24.15■■□□□ 1.46
ATG4D-201ENST00000309469 RIC8AQ9NPQ8 531 aa24.15■■□□□ 1.46
ATG4D-201ENST00000309469 MAN1B1Q9UKM7 699 aa24.15■■□□□ 1.46
ATG4D-201ENST00000309469 FER1L6Q2WGJ9 1857 aa24.15■■□□□ 1.46
ATG4D-201ENST00000309469 WNT10BO00744 389 aa24.14■■□□□ 1.46
ATG4D-201ENST00000309469 CCNT1O60563 726 aaKnown RBP24.14■■□□□ 1.46
ATG4D-201ENST00000309469 NDUFB10O96000 172 aa24.14■■□□□ 1.46
ATG4D-201ENST00000309469 SH3RF1Q7Z6J0 888 aa24.14■■□□□ 1.46
ATG4D-201ENST00000309469 PAGE5Q96GU1 130 aa24.14■■□□□ 1.46
ATG4D-201ENST00000309469 TMEM39BQ9GZU3 492 aa24.14■■□□□ 1.46
ATG4D-201ENST00000309469 SYNPO2Q9UMS6 1093 aa24.14■■□□□ 1.46
ATG4D-201ENST00000309469 GOLGB1Q14789 3259 aaKnown RBP24.14■■□□□ 1.45
ATG4D-201ENST00000309469 BRCA1P38398 1863 aaKnown RBP24.14■■□□□ 1.45
ATG4D-201ENST00000309469 SMTNL1A8MU46 457 aa24.14■■□□□ 1.45
ATG4D-201ENST00000309469 PRPHP41219 470 aa24.14■■□□□ 1.45
ATG4D-201ENST00000309469 NBPF9Q3BBW0 867 aa24.14■■□□□ 1.45
ATG4D-201ENST00000309469 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.14■■□□□ 1.45
ATG4D-201ENST00000309469 IQUBQ8NA54 791 aa24.14■■□□□ 1.45
ATG4D-201ENST00000309469 TBC1D12O60347 775 aa24.13■■□□□ 1.45
ATG4D-201ENST00000309469 MMP14P50281 582 aa24.13■■□□□ 1.45
ATG4D-201ENST00000309469 E2F4Q16254 413 aa24.13■■□□□ 1.45
ATG4D-201ENST00000309469 SPC24Q8NBT2 197 aa24.13■■□□□ 1.45
ATG4D-201ENST00000309469 SPATA20Q8TB22 786 aa24.13■■□□□ 1.45
ATG4D-201ENST00000309469 LTBP3Q9NS15 1303 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 A0A1W2PRG0 241 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 IKBKBO14920 756 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 SMC2O95347 1197 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 BMP6P22004 513 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 ORC2Q13416 577 aaPredicted RBP24.12■■□□□ 1.45
ATG4D-201ENST00000309469 QRICH1Q2TAL8 776 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 TRIML1Q8N9V2 468 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 SHTN1A0MZ66 631 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 GOLGA6L6A8MZA4 724 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 TXLNAP40222 546 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 PTGER2P43116 358 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 AFMP43652 599 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 MRPL12P52815 198 aaKnown RBP24.12■■□□□ 1.45
ATG4D-201ENST00000309469 ZNF280AP59817 542 aaPredicted RBP24.12■■□□□ 1.45
ATG4D-201ENST00000309469 NCAPHQ15003 741 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 CUL5Q93034 780 aa24.12■■□□□ 1.45
ATG4D-201ENST00000309469 NUP88Q99567 741 aaPredicted RBP24.12■■□□□ 1.45
ATG4D-201ENST00000309469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.12■■□□□ 1.45
ATG4D-201ENST00000309469 NEMFO60524 1076 aa24.11■■□□□ 1.45
ATG4D-201ENST00000309469 OR52Z1P0C646 297 aa24.11■■□□□ 1.45
ATG4D-201ENST00000309469 BMP3P12645 472 aa24.11■■□□□ 1.45
ATG4D-201ENST00000309469 RPS12P25398 132 aaKnown RBP24.11■■□□□ 1.45
ATG4D-201ENST00000309469 MORC3Q14149 939 aa24.11■■□□□ 1.45
ATG4D-201ENST00000309469 CDAN1Q8IWY9 1227 aa24.11■■□□□ 1.45
ATG4D-201ENST00000309469 ARHGEF10LQ9HCE6 1279 aa24.11■■□□□ 1.45
ATG4D-201ENST00000309469 PGAP2Q9UHJ9 254 aa24.11■■□□□ 1.45
ATG4D-201ENST00000309469 CDC25BP30305 580 aa24.1■■□□□ 1.45
ATG4D-201ENST00000309469 CLK2P49760 499 aaKnown RBP24.1■■□□□ 1.45
ATG4D-201ENST00000309469 TPM4P67936 248 aa24.1■■□□□ 1.45
ATG4D-201ENST00000309469 CDC37Q16543 378 aaPredicted RBP24.1■■□□□ 1.45
ATG4D-201ENST00000309469 PSTPIP2Q9H939 334 aa24.1■■□□□ 1.45
ATG4D-201ENST00000309469 ZBTB21Q9ULJ3 1066 aa24.1■■□□□ 1.45
ATG4D-201ENST00000309469 TPM3P06753 285 aa24.1■■□□□ 1.45
ATG4D-201ENST00000309469 MRFAP1L1Q96HT8 127 aa24.1■■□□□ 1.45
ATG4D-201ENST00000309469 PSDA5PKW4 1024 aaPredicted RBP24.09■■□□□ 1.45
ATG4D-201ENST00000309469 CDC25AP30304 524 aa24.09■■□□□ 1.45
ATG4D-201ENST00000309469 UBE2SQ16763 222 aa24.09■■□□□ 1.45
ATG4D-201ENST00000309469 PDXDC2PQ6P474 469 aa24.09■■□□□ 1.45
ATG4D-201ENST00000309469 MIGA2Q7L4E1 593 aa24.09■■□□□ 1.45
ATG4D-201ENST00000309469 DRC7Q8IY82 874 aa24.09■■□□□ 1.45
ATG4D-201ENST00000309469 MLKLQ8NB16 471 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms