RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 COA7Q96BR5 231 aa20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 MTMR8Q96EF0 704 aa20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 RRP36Q96EU6 259 aaKnown RBP20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 ZSCAN31Q96LW9 406 aaPredicted RBP20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 SEC63Q9UGP8 760 aaKnown RBP20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 LIMCH1Q9UPQ0 1083 aa20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 IVNS1ABPQ9Y6Y0 642 aa20.77■□□□□ 0.92
SSSCA1-201ENST00000309328 A0A0G2JMZ2 1700 aa20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 ZBTB5O15062 677 aa20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 CDKL5O76039 1030 aa20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 CDC37Q16543 378 aaPredicted RBP20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 ABRAQ8N0Z2 381 aa20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 MOV10L1Q9BXT6 1211 aaKnown RBP20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 SLKQ9H2G2 1235 aaPredicted RBP20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 JMJD4Q9H9V9 463 aa20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 SH2B1Q9NRF2 756 aaPredicted RBP20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 TSKSQ9UJT2 592 aa20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 HPS5Q9UPZ3 1129 aa20.76■□□□□ 0.91
SSSCA1-201ENST00000309328 CPLX1O14810 134 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 RXRAP19793 462 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 PSMC4P43686 418 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 LBX1P52954 281 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 POTEEQ6S8J3 1075 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 CCDC144CPQ8IYA2 1237 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 CPXCR1Q8N123 301 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 SOCS4Q8WXH5 440 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 AMNQ9BXJ7 453 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 CCPG1Q9ULG6 757 aa20.75■□□□□ 0.91
SSSCA1-201ENST00000309328 RLFQ13129 1914 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 PNMA6FA0A0J9YX94 578 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 hCG_1984214I3L0E3 225 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 TNPO2O14787 897 aaKnown RBP20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 PFKFB2O60825 505 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 FMNL1O95466 1100 aaPredicted RBP20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 Q3C1V9 767 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 TEX2Q8IWB9 1127 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 ZNF713Q8N859 430 aaPredicted RBP20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 EFCC1Q9HA90 598 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 RAVER2Q9HCJ3 691 aaKnown RBP20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 TPCN1Q9ULQ1 816 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 ZNF536O15090 1300 aa20.74■□□□□ 0.91
SSSCA1-201ENST00000309328 PLEKHA8P1O95397 391 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 ERCC3P19447 782 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 AKAP17AQ02040 695 aaKnown RBP20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 QRICH1Q2TAL8 776 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 CCDC174Q6PII3 467 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 PLEKHH3Q7Z736 793 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 NCAPG2Q86XI2 1143 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 FBXO11Q86XK2 927 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 SRBD1Q8N5C6 995 aaKnown RBP20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 ACAD9Q9H845 621 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 VAT1LQ9HCJ6 419 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 SLC5A4Q9NY91 659 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 ABCB11O95342 1321 aa20.73■□□□□ 0.91
SSSCA1-201ENST00000309328 PARP14Q460N5 1801 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 CYTH3O43739 400 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 FCER1AP12319 257 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 IFNAR1P17181 557 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 PKN2Q16513 984 aaKnown RBP20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 GPR142Q7Z601 462 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 TRIM22Q8IYM9 498 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 CD99L2Q8TCZ2 262 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 RNF26Q9BY78 433 aaPredicted RBP20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 PORCNQ9H237 461 aa20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 FAM217BQ9NTX9 383 aaPredicted RBP20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 MRPL11Q9Y3B7 192 aaKnown RBP20.72■□□□□ 0.91
SSSCA1-201ENST00000309328 SLC15A5A6NIM6 579 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 CDC27P30260 824 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 ADD1P35611 737 aaKnown RBP20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 KCTD2Q14681 263 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 WDR78Q5VTH9 848 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 RAB11FIP4Q86YS3 637 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 FAM177A1Q8N128 213 aaPredicted RBP20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 SAMD3Q8N6K7 520 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 RGS22Q8NE09 1264 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 GTF3C6Q969F1 213 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 TRIM47Q96LD4 638 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 NUDT12Q9BQG2 462 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 CPVLQ9H3G5 476 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 PFASO15067 1338 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 CNTNAP5Q8WYK1 1306 aa20.71■□□□□ 0.91
SSSCA1-201ENST00000309328 ALAS1P13196 640 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 PTPREP23469 700 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 FUT2Q10981 343 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 CTU1Q7Z7A3 348 aaKnown RBP20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 NBPF11Q86T75 865 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 MCF2L2Q86YR7 1114 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 AGBL1Q96MI9 1066 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 TRERF1Q96PN7 1200 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 PIGSQ96S52 555 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 RNF146Q9NTX7 359 aa20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 MAP3K20Q9NYL2 800 aaKnown RBP20.7■□□□□ 0.9
SSSCA1-201ENST00000309328 PRPF3O43395 683 aaKnown RBP20.69■□□□□ 0.9
SSSCA1-201ENST00000309328 CCT2P78371 535 aaKnown RBP20.69■□□□□ 0.9
SSSCA1-201ENST00000309328 GRB14Q14449 540 aa20.69■□□□□ 0.9
SSSCA1-201ENST00000309328 ME3Q16798 604 aa20.69■□□□□ 0.9
SSSCA1-201ENST00000309328 TRMT44Q8IYL2 757 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms