RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 MADDQ8WXG6 1647 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 CPDO75976 1380 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 CAPN9O14815 690 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 STK10O94804 968 aaKnown RBP11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 POSTNQ15063 836 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 TMEM179Q6ZVK1 233 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 ATP6V0A1Q93050 837 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 TSGA10Q9BZW7 698 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM170AA1A519 330 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 DLATP10515 647 aaKnown RBP11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 MFSD14CQ5VZR4 134 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 BARGINQ6ZT62 677 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 NELFBQ8WX92 580 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 NUB1Q9Y5A7 615 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 INO80B-WBP1J3KQ70 363 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 STK25O00506 426 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 ZNF202O95125 648 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 ARHGAP44Q17R89 818 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 CDHR1Q96JP9 859 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 INO80BQ9C086 356 aaPredicted RBP11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 CCDC175P0C221 793 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
SYNPO2-201ENST00000307142 CTAGE9A4FU28 777 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 PUS7LQ9H0K6 701 aaKnown RBP11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 RABGAP1Q9Y3P9 1069 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 CAPZA3Q96KX2 299 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 MMP19Q99542 508 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 TMEM191BP0C7N4 346 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 ME3Q16798 604 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 PGBD1Q96JS3 809 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 SLC7A3Q8WY07 619 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 PIGSQ96S52 555 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 JPH2Q9BR39 696 aaPredicted RBP11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 ARPP19P56211 112 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 ZNRF3Q9ULT6 936 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM204AQ9H8W3 233 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 ELP3Q9H9T3 547 aa11.85□□□□□ -0.51
SYNPO2-201ENST00000307142 OATP04181 439 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 MYL5Q02045 173 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM173BQ6P4H8 233 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 SLF1Q9BQI6 1058 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 PIH1D3Q9NQM4 214 aaKnown RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 PRDM5Q9NQX1 630 aaPredicted RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 LRRIQ1Q96JM4 1722 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 PIK3CAP42336 1068 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 CDC37Q16543 378 aaPredicted RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 SND1Q7KZF4 910 aaKnown RBP eCLIP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 METTL23Q86XA0 190 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 NOSTRINQ8IVI9 506 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 MARCH10Q8NA82 808 aaPredicted RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 MTUS1Q9ULD2 1270 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 H7C1W4 665 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 PPP1R9BQ96SB3 815 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 EIF2AK2P19525 551 aaKnown RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 ARMCX5Q6P1M9 558 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 ZSCAN30Q86W11 494 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 PLCD4Q9BRC7 762 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 TECPR2O15040 1411 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 SNAP23O00161 211 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 RC3H1Q5TC82 1133 aaKnown RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 CTR9Q6PD62 1173 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 PPP1R21Q6ZMI0 780 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 EXOC8Q8IYI6 725 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 INO80Q9ULG1 1556 aaPredicted RBP11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 USP17L10C9JJH3 530 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 CCDC25Q86WR0 208 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
SYNPO2-201ENST00000307142 SETBP1Q9Y6X0 1596 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 XPOTO43592 962 aaKnown RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 SH3BP5O60239 455 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 SKILP12757 684 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 ATP2A2P16615 1042 aaKnown RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 FASTKD5Q7L8L6 764 aaKnown RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PCDHA4Q9UN74 947 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 HSF2BPO75031 334 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 MCAMP43121 646 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 KARSQ15046 597 aaKnown RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 MTERF2Q49AM1 385 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 STIM2Q9P246 746 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 RIPOR2Q9Y4F9 1068 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PRDX5P30044 214 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PPP2R5DQ14738 602 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 PPP2R5AQ15172 486 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 LZTFL1Q9NQ48 299 aa11.83□□□□□ -0.52
SYNPO2-201ENST00000307142 ESPNB1AK53 854 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms