RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 GLT8D2Q9H1C3 349 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 PRR12Q9ULL5 1215 aa20.07■□□□□ 0.8
KRT28-201ENST00000306658 WDR46O15213 610 aaKnown RBP20.06■□□□□ 0.8
KRT28-201ENST00000306658 PPP1R11O60927 126 aaPredicted RBP20.06■□□□□ 0.8
KRT28-201ENST00000306658 BMP15O95972 392 aa20.06■□□□□ 0.8
KRT28-201ENST00000306658 ATP2B1P20020 1258 aa20.06■□□□□ 0.8
KRT28-201ENST00000306658 KRT25Q7Z3Z0 450 aa20.06■□□□□ 0.8
KRT28-201ENST00000306658 ZNF280CQ8ND82 737 aa20.06■□□□□ 0.8
KRT28-201ENST00000306658 FZD1Q9UP38 647 aa20.06■□□□□ 0.8
KRT28-201ENST00000306658 PCDHB6Q9Y5E3 794 aa20.06■□□□□ 0.8
KRT28-201ENST00000306658 PCDHA1Q9Y5I3 950 aa20.06■□□□□ 0.8
KRT28-201ENST00000306658 WDR90Q96KV7 1748 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 FAM205CA6NFA0 338 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 POTECB2RU33 542 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 MRPL12P52815 198 aaKnown RBP20.05■□□□□ 0.8
KRT28-201ENST00000306658 MAP3K9P80192 1104 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 SPP2Q13103 211 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 PRKG1Q13976 671 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 FBXO11Q86XK2 927 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 REXO1Q8N1G1 1221 aaKnown RBP20.05■□□□□ 0.8
KRT28-201ENST00000306658 RIC8AQ9NPQ8 531 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 TMEM63CQ9P1W3 806 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 ZHX2Q9Y6X8 837 aa20.05■□□□□ 0.8
KRT28-201ENST00000306658 A0A1W2PQ27 194 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 A0A1W2PQ64 194 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 A0A1W2PQD8 194 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 IREB2P48200 963 aaKnown RBP20.04■□□□□ 0.8
KRT28-201ENST00000306658 BACE1P56817 501 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 MTMR2Q13614 643 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 TTC38Q5R3I4 469 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 RASGRP4Q8TDF6 673 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 CUL5Q93034 780 aa20.04■□□□□ 0.8
KRT28-201ENST00000306658 C19orf81C9J6K1 198 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 ADAMTS3O15072 1205 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 MARCKSP29966 332 aaPredicted RBP20.03■□□□□ 0.8
KRT28-201ENST00000306658 NOM1Q5C9Z4 860 aaKnown RBP20.03■□□□□ 0.8
KRT28-201ENST00000306658 CCAR1Q8IX12 1150 aaKnown RBP20.03■□□□□ 0.8
KRT28-201ENST00000306658 KIFC2Q96AC6 838 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 CDCA5Q96FF9 252 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 PSTPIP2Q9H939 334 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 MORC2Q9Y6X9 1032 aaPredicted RBP20.03■□□□□ 0.8
KRT28-201ENST00000306658 DCAF8L1A6NGE4 600 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 NONOQ15233 471 aaKnown RBP eCLIP20.03■□□□□ 0.8
KRT28-201ENST00000306658 ZSCAN23Q3MJ62 389 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 CCDC183Q5T5S1 534 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 DLK2Q6UY11 383 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 CCDC73Q6ZRK6 1079 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 CSADQ9Y600 493 aa20.03■□□□□ 0.8
KRT28-201ENST00000306658 LIG1P18858 919 aa20.02■□□□□ 0.8
KRT28-201ENST00000306658 KRI1Q8N9T8 703 aaKnown RBP20.02■□□□□ 0.8
KRT28-201ENST00000306658 PRPF38AQ8NAV1 312 aaKnown RBP20.02■□□□□ 0.8
KRT28-201ENST00000306658 EMILIN3Q9NT22 766 aa20.02■□□□□ 0.8
KRT28-201ENST00000306658 BIN2Q9UBW5 565 aaPredicted RBP20.02■□□□□ 0.8
KRT28-201ENST00000306658 CLEC11AQ9Y240 323 aa20.02■□□□□ 0.8
KRT28-201ENST00000306658 CUTAO60888 179 aa20.01■□□□□ 0.79
KRT28-201ENST00000306658 LETM1O95202 739 aaPredicted RBP20.01■□□□□ 0.79
KRT28-201ENST00000306658 SNAP25P60880 206 aa20.01■□□□□ 0.79
KRT28-201ENST00000306658 AXDND1Q5T1B0 1012 aaPredicted RBP20.01■□□□□ 0.79
KRT28-201ENST00000306658 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.01■□□□□ 0.79
KRT28-201ENST00000306658 MRPS27Q92552 414 aaKnown RBP20.01■□□□□ 0.79
KRT28-201ENST00000306658 RANBP17Q9H2T7 1088 aaKnown RBP20.01■□□□□ 0.79
KRT28-201ENST00000306658 VCAM1P19320 739 aa20■□□□□ 0.79
KRT28-201ENST00000306658 CMA1P23946 247 aa20■□□□□ 0.79
KRT28-201ENST00000306658 VGLL4Q14135 290 aa20■□□□□ 0.79
KRT28-201ENST00000306658 ZNF174Q15697 407 aa20■□□□□ 0.79
KRT28-201ENST00000306658 INF2Q27J81 1249 aa20■□□□□ 0.79
KRT28-201ENST00000306658 FSIP1Q8NA03 581 aa20■□□□□ 0.79
KRT28-201ENST00000306658 RBM46Q8TBY0 533 aaKnown RBP20■□□□□ 0.79
KRT28-201ENST00000306658 SLF1Q9BQI6 1058 aa20■□□□□ 0.79
KRT28-201ENST00000306658 TANGO6Q9C0B7 1094 aa20■□□□□ 0.79
KRT28-201ENST00000306658 DDX19AQ9NUU7 478 aaKnown RBP20■□□□□ 0.79
KRT28-201ENST00000306658 DACT1Q9NYF0 836 aa20■□□□□ 0.79
KRT28-201ENST00000306658 PTPREP23469 700 aa20■□□□□ 0.79
KRT28-201ENST00000306658 USH1GQ495M9 461 aa20■□□□□ 0.79
KRT28-201ENST00000306658 JAKMIP3Q5VZ66 844 aa20■□□□□ 0.79
KRT28-201ENST00000306658 MCTP2Q6DN12 878 aa20■□□□□ 0.79
KRT28-201ENST00000306658 C12orf42Q96LP6 360 aa20■□□□□ 0.79
KRT28-201ENST00000306658 FBXO28Q9NVF7 368 aa20■□□□□ 0.79
KRT28-201ENST00000306658 AFG3L2Q9Y4W6 797 aa20■□□□□ 0.79
KRT28-201ENST00000306658 SNCAIPQ9Y6H5 919 aa20■□□□□ 0.79
KRT28-201ENST00000306658 FAM160A1Q05DH4 1040 aa19.99■□□□□ 0.79
KRT28-201ENST00000306658 TTLL12Q14166 644 aaPredicted RBP19.99■□□□□ 0.79
KRT28-201ENST00000306658 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
KRT28-201ENST00000306658 ANKRD13AQ8IZ07 590 aa19.99■□□□□ 0.79
KRT28-201ENST00000306658 RPAP3Q9H6T3 665 aaPredicted RBP19.99■□□□□ 0.79
KRT28-201ENST00000306658 TMOD4Q9NZQ9 345 aa19.99■□□□□ 0.79
KRT28-201ENST00000306658 SRPRBQ9Y5M8 271 aaKnown RBP19.99■□□□□ 0.79
KRT28-201ENST00000306658 NR1I2O75469 434 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 MCM7P33993 719 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 CLK2P49760 499 aaKnown RBP19.98■□□□□ 0.79
KRT28-201ENST00000306658 HMGCS2P54868 508 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 ZNF445P59923 1031 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 PTGDRQ13258 359 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 SAMD1Q6SPF0 538 aaPredicted RBP19.98■□□□□ 0.79
KRT28-201ENST00000306658 NEK8Q86SG6 692 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 FERMT2Q96AC1 680 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 PHIPQ8WWQ0 1821 aa19.98■□□□□ 0.79
KRT28-201ENST00000306658 FLOT1O75955 427 aa19.97■□□□□ 0.79
KRT28-201ENST00000306658 FDX1P10109 184 aa19.97■□□□□ 0.79
KRT28-201ENST00000306658 ATP2C1P98194 919 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms