RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RPS8P62241 208 aaKnown RBP14.74□□□□□ -0.05
DDX54-201ENST00000306014 SF3A3Q12874 501 aaKnown RBP eCLIP14.74□□□□□ -0.052e-7■■■■■ 49.4
DDX54-201ENST00000306014 MSL1Q68DK7 614 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 RWDD2AQ9UIY3 292 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 KLRF2D3W0D1 207 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 TCP1P17987 556 aaKnown RBP14.74□□□□□ -0.05
DDX54-201ENST00000306014 EEF1GP26641 437 aaKnown RBP14.74□□□□□ -0.05
DDX54-201ENST00000306014 RPS6KA1Q15418 735 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 RBM43Q6ZSC3 357 aaKnown RBP14.74□□□□□ -0.05
DDX54-201ENST00000306014 ANKS4BQ8N8V4 417 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 CCDC26Q8TAB7 109 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 CAPS2Q9BXY5 557 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 ADGRG1Q9Y653 693 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 RPL13P26373 211 aaKnown RBP14.74□□□□□ -0.05
DDX54-201ENST00000306014 GUCY1A2P33402 732 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 RFX5P48382 616 aaPredicted RBP14.74□□□□□ -0.05
DDX54-201ENST00000306014 TRAPPC10P48553 1259 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 ADCY7P51828 1080 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 PDIA6Q15084 440 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 KCTD16Q68DU8 428 aa14.74□□□□□ -0.05
DDX54-201ENST00000306014 ANKRD65E5RJM6 399 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 CXCR5P32302 372 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 VWA3BQ502W6 1294 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 TRAPPC3LQ5T215 181 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 WDR66Q8TBY9 1149 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.73□□□□□ -0.05
DDX54-201ENST00000306014 PRPF3O43395 683 aaKnown RBP14.73□□□□□ -0.05
DDX54-201ENST00000306014 PRPHP41219 470 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 IRX3P78415 501 aaPredicted RBP14.73□□□□□ -0.05
DDX54-201ENST00000306014 CUL4BQ13620 913 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 ST5P78524 1137 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 TCP11X2Q5H9J9 407 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 PAIP2Q9BPZ3 127 aaKnown RBP14.73□□□□□ -0.05
DDX54-201ENST00000306014 TSKSQ9UJT2 592 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 MRFAP1Q9Y605 127 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 WDR19Q8NEZ3 1342 aa14.73□□□□□ -0.05
DDX54-201ENST00000306014 A6NNZ2 444 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 KIF4AO95239 1232 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 FMR1Q06787 632 aaKnown RBP eCLIP14.72□□□□□ -0.052e-6■■■■□ 20.3
DDX54-201ENST00000306014 C2orf54Q08AI8 447 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 TUBB8Q3ZCM7 444 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 NEK8Q86SG6 692 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 LRRC45Q96CN5 670 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 LZTS2Q9BRK4 669 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 LSM14BQ9BX40 385 aaKnown RBP14.72□□□□□ -0.05
DDX54-201ENST00000306014 PPANQ9NQ55 473 aaKnown RBP14.72□□□□□ -0.05
DDX54-201ENST00000306014 MROH7-TTC4A0A0A0MT08 1334 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 CALRP27797 417 aaKnown RBP14.72□□□□□ -0.05
DDX54-201ENST00000306014 ANTXR2P58335 489 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 RASSF7Q02833 373 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 ZNF579Q8NAF0 562 aaKnown RBP14.72□□□□□ -0.05
DDX54-201ENST00000306014 EYA3Q99504 573 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 E7EVH7 732 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 EPB41P11171 864 aaKnown RBP14.72□□□□□ -0.05
DDX54-201ENST00000306014 MRPS25P82663 173 aaKnown RBP14.72□□□□□ -0.05
DDX54-201ENST00000306014 CEP85LQ5SZL2 805 aa14.72□□□□□ -0.05
DDX54-201ENST00000306014 UTYO14607 1347 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 SRGAP2O75044 1071 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 UFL1O94874 794 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 GBP6Q6ZN66 633 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 MYOCDQ8IZQ8 938 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 PIGBQ92521 554 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 P2RX5Q93086 422 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 CABS1Q96KC9 395 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 PLVAPQ9BX97 442 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 NSRP1Q9H0G5 558 aaKnown RBP14.71□□□□□ -0.05
DDX54-201ENST00000306014 STK36Q9NRP7 1315 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 ABHD10Q9NUJ1 306 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 KCNK3O14649 394 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 KCNJ6P48051 423 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 POLR2FP61218 127 aaKnown RBP14.71□□□□□ -0.05
DDX54-201ENST00000306014 EHMT1Q9H9B1 1298 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 TRIM49BA6NDI0 452 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 EZRP15311 586 aaKnown RBP14.71□□□□□ -0.05
DDX54-201ENST00000306014 GUCY2DQ02846 1103 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 PEX26Q7Z412 305 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 DAAM2Q86T65 1068 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 TUBE1Q9UJT0 475 aa14.71□□□□□ -0.05
DDX54-201ENST00000306014 CCDC174Q6PII3 467 aa14.71□□□□□ -0.06
DDX54-201ENST00000306014 IQCDQ96DY2 449 aa14.71□□□□□ -0.06
DDX54-201ENST00000306014 ZC3H12CQ9C0D7 883 aaKnown RBP14.71□□□□□ -0.06
DDX54-201ENST00000306014 SENP2Q9HC62 589 aa14.71□□□□□ -0.06
DDX54-201ENST00000306014 MTRF1LQ9UGC7 380 aaKnown RBP14.71□□□□□ -0.06
DDX54-201ENST00000306014 PCDHA4Q9UN74 947 aa14.71□□□□□ -0.06
DDX54-201ENST00000306014 RUFY4Q6ZNE9 571 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 SGMS1Q86VZ5 419 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 STAG1Q8WVM7 1258 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 NHEJ1Q9H9Q4 299 aaPredicted RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 A0A1W2PRG0 241 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 VIMP08670 466 aaKnown RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 IL6STP40189 918 aaPredicted RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 EHHADHQ08426 723 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 USP49Q70CQ1 688 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 CERKQ8TCT0 537 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 DHTKD1Q96HY7 919 aaPredicted RBP14.7□□□□□ -0.06
DDX54-201ENST00000306014 CAPN7Q9Y6W3 813 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 KIF20BQ96Q89 1820 aa14.7□□□□□ -0.06
DDX54-201ENST00000306014 GOLGA8KD6RF30 607 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms