RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 APBA2Q99767 749 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 DSCC1Q9BVC3 393 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 EHD4Q9H223 541 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 HELLSQ9NRZ9 838 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 SPDYE16A6NNV3 312 aaPredicted RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 MBD4O95243 580 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 COG2Q14746 738 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 LRRC26Q2I0M4 334 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 KIAA1755Q5JYT7 1200 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 GTF3C6Q969F1 213 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 C12orf42Q96LP6 360 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 UBE2OQ9C0C9 1292 aaKnown RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 SCAND2PQ9GZW5 306 aaPredicted RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 DCP1AQ9NPI6 582 aaPredicted RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 PAG1Q9NWQ8 432 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 TAF6LQ9Y6J9 622 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 PFASO15067 1338 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 DOCK2Q92608 1830 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 A0A0U1RQG5 324 aaPredicted RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 SLC15A5A6NIM6 579 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 AKR1B1P15121 316 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 CAPN2P17655 700 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 COL9A3Q14050 684 aaPredicted RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 PRAMEF19Q5SWL8 479 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 Q7L0L9 218 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 NCAPG2Q86XI2 1143 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 SLC17A8Q8NDX2 589 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 GDF15Q99988 308 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 LLPHQ9BRT6 129 aaKnown RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 MOV10L1Q9BXT6 1211 aaKnown RBP9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 HOXC10Q9NYD6 342 aa9.07□□□□□ -0.96
TM4SF1-201ENST00000305366 TCRBV5S4A2TA0A5A2 114 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 KDM4AO75164 1064 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 FLOT1O75955 427 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 CYP21A2P08686 494 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 ERCC3P19447 782 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 GABPAQ06546 454 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 ZMYM1Q5SVZ6 1142 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 GJC2Q5T442 439 aaPredicted RBP9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 AGXT2Q9BYV1 514 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 DOCK1Q14185 1865 aa9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 RBBP6Q7Z6E9 1792 aaKnown RBP9.06□□□□□ -0.96
TM4SF1-201ENST00000305366 USP17L12C9JPN9 530 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 USP17L21D6R901 530 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 ATXN8OSP0DMR3 200 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 CCDC192P0DO97 292 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 ADORA2AP29274 412 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 SETQ01105 290 aaPredicted RBP9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 DEFB123Q8N688 67 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 TRPV1Q8NER1 839 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 SMARCC2Q8TAQ2 1214 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 CHMP4CQ96CF2 233 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 ATG4CQ96DT6 458 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 TCEANC2Q96MN5 208 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 ZSCAN16Q9H4T2 348 aaPredicted RBP9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 DDX20Q9UHI6 824 aaKnown RBP9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 SLC4A4Q9Y6R1 1079 aa9.05□□□□□ -0.96
TM4SF1-201ENST00000305366 PFKFB2O60825 505 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 COBLO75128 1261 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 PTMAP06454 111 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 ADD2P35612 726 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 CDK8P49336 464 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 ICA1Q05084 483 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 RESTQ13127 1097 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 GRB14Q14449 540 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 GIMAP6Q6P9H5 292 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 TMED8Q6PL24 325 aaPredicted RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 LBX2Q6XYB7 198 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 RBM43Q6ZSC3 357 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 Q6ZUG5 572 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 TMEM179Q6ZVK1 233 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 DHX32Q7L7V1 743 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 SIAH1Q8IUQ4 282 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 AMOTL1Q8IY63 956 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 FBXL16Q8N461 479 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 FERMT2Q96AC1 680 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 SEC62Q99442 399 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 SPATC1LQ9H0A9 340 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 ARHGEF10LQ9HCE6 1279 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 DDX19AQ9NUU7 478 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 USP25Q9UHP3 1055 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 ATP11BQ9Y2G3 1177 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 SZT2Q5T011 3432 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 A0A1W2PPC1 479 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 ADCY5O95622 1261 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 COL6A1P12109 1028 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 BMP8BP34820 402 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 HMGN5P82970 282 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 EXOSC10Q01780 885 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 LRRFIP1Q32MZ4 808 aaKnown RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 CCDC129Q6ZRS4 1044 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 IFNLR1Q8IU57 520 aaPredicted RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 TDHQ8IZJ6 230 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 LEO1Q8WVC0 666 aaPredicted RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 LBHD1Q9BQE6 289 aaPredicted RBP9.04□□□□□ -0.96
TM4SF1-201ENST00000305366 NUP62CLQ9H1M0 184 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms