RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 U2AF1L4Q8WU68 220 aaKnown RBP21.3■■□□□ 1
TSR1-201ENST00000301364 GOLGA8HP0CJ92 632 aa21.3■■□□□ 1
TSR1-201ENST00000301364 CTNNA1P35221 906 aaKnown RBP21.3■■□□□ 1
TSR1-201ENST00000301364 NT5C2P49902 561 aa21.3■■□□□ 1
TSR1-201ENST00000301364 RESP18Q5W5W9 173 aa21.3■■□□□ 1
TSR1-201ENST00000301364 USP40Q9NVE5 1235 aa21.3■■□□□ 1
TSR1-201ENST00000301364 LOC102724428A0A0B4J2F2 783 aa21.3■■□□□ 1
TSR1-201ENST00000301364 CFBP00751 764 aa21.3■■□□□ 1
TSR1-201ENST00000301364 ATP1A3P13637 1013 aa21.3■■□□□ 1
TSR1-201ENST00000301364 SIK1P57059 783 aa21.3■■□□□ 1
TSR1-201ENST00000301364 POLR2FP61218 127 aaKnown RBP21.3■■□□□ 1
TSR1-201ENST00000301364 JDP2Q8WYK2 163 aa21.3■■□□□ 1
TSR1-201ENST00000301364 ZNF804BA4D1E1 1349 aa21.3■■□□□ 1
TSR1-201ENST00000301364 E7EVH7 732 aa21.3■■□□□ 1
TSR1-201ENST00000301364 GRAMD1CQ8IYS0 662 aa21.3■■□□□ 1
TSR1-201ENST00000301364 AIFM3Q96NN9 605 aa21.3■■□□□ 1
TSR1-201ENST00000301364 TMEM94Q12767 1356 aa21.29■■□□□ 1
TSR1-201ENST00000301364 DENND2CQ68D51 928 aa21.29■■□□□ 1
TSR1-201ENST00000301364 CAPS2Q9BXY5 557 aa21.29■■□□□ 1
TSR1-201ENST00000301364 DDX25Q9UHL0 483 aaKnown RBP21.29■■□□□ 1
TSR1-201ENST00000301364 H2AFZP0C0S5 128 aa21.29■■□□□ 1
TSR1-201ENST00000301364 H2AFVQ71UI9 128 aa21.29■■□□□ 1
TSR1-201ENST00000301364 CEP63Q96MT8 703 aa21.29■■□□□ 1
TSR1-201ENST00000301364 PCDHB6Q9Y5E3 794 aa21.29■■□□□ 1
TSR1-201ENST00000301364 KRIT1O00522 736 aa21.29■■□□□ 1
TSR1-201ENST00000301364 PRKAB2O43741 272 aa21.29■■□□□ 1
TSR1-201ENST00000301364 HOXA7P31268 230 aaPredicted RBP21.29■■□□□ 1
TSR1-201ENST00000301364 SP4Q02446 784 aa21.29■■□□□ 1
TSR1-201ENST00000301364 ADAM9Q13443 819 aa21.29■■□□□ 1
TSR1-201ENST00000301364 SMYD4Q8IYR2 804 aaPredicted RBP21.29■■□□□ 1
TSR1-201ENST00000301364 GUCY2FP51841 1108 aa21.29■■□□□ 1
TSR1-201ENST00000301364 CEP85LQ5SZL2 805 aa21.29■■□□□ 1
TSR1-201ENST00000301364 FMR1NBQ8N0W7 255 aaPredicted RBP21.29■■□□□ 1
TSR1-201ENST00000301364 TEKT1Q969V4 418 aa21.29■■□□□ 1
TSR1-201ENST00000301364 STRBPQ96SI9 672 aaKnown RBP21.29■■□□□ 1
TSR1-201ENST00000301364 MAK16Q9BXY0 300 aaKnown RBP21.29■■□□□ 1
TSR1-201ENST00000301364 TULP4Q9NRJ4 1543 aa21.28■■□□□ 1
TSR1-201ENST00000301364 BUB1O43683 1085 aa21.28■■□□□ 1
TSR1-201ENST00000301364 NCBP1Q09161 790 aaKnown RBP21.28■■□□□ 1
TSR1-201ENST00000301364 STRN3Q13033 797 aa21.28■■□□□ 1
TSR1-201ENST00000301364 BZW2Q9Y6E2 419 aaKnown RBP21.28■■□□□ 1
TSR1-201ENST00000301364 GTF2IP78347 998 aa21.28■■□□□ 1
TSR1-201ENST00000301364 TPH2Q8IWU9 490 aa21.28■■□□□ 1
TSR1-201ENST00000301364 OSBPL5Q9H0X9 879 aaPredicted RBP21.28■■□□□ 1
TSR1-201ENST00000301364 GPHNQ9NQX3 736 aaPredicted RBP21.28■■□□□ 1
TSR1-201ENST00000301364 TXNDC16Q9P2K2 825 aa21.28■■□□□ 1
TSR1-201ENST00000301364 COL4A3BPQ9Y5P4 624 aa21.28■■□□□ 1
TSR1-201ENST00000301364 GAS8O95995 478 aa21.28■■□□□ 1
TSR1-201ENST00000301364 CRKLP46109 303 aaKnown RBP21.28■■□□□ 1
TSR1-201ENST00000301364 CLCN6P51797 869 aa21.28■■□□□ 1
TSR1-201ENST00000301364 TTLL11Q8NHH1 800 aa21.28■■□□□ 1
TSR1-201ENST00000301364 LARP4BQ92615 738 aaKnown RBP21.28■■□□□ 1
TSR1-201ENST00000301364 RIC8AQ9NPQ8 531 aa21.28■■□□□ 1
TSR1-201ENST00000301364 PIH1D3Q9NQM4 214 aaKnown RBP21.28■■□□□ 1
TSR1-201ENST00000301364 KCNG1Q9UIX4 513 aa21.28■■□□□ 1
TSR1-201ENST00000301364 AGTPBP1Q9UPW5 1226 aa21.28■■□□□ 1
TSR1-201ENST00000301364 LMTK2Q8IWU2 1503 aa21.28■■□□□ 1
TSR1-201ENST00000301364 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
TSR1-201ENST00000301364 SEC31AO94979 1220 aaKnown RBP21.28■■□□□ 1
TSR1-201ENST00000301364 PTPREP23469 700 aa21.28■■□□□ 1
TSR1-201ENST00000301364 BTDP43251 543 aa21.28■■□□□ 1
TSR1-201ENST00000301364 ARHGAP44Q17R89 818 aa21.28■■□□□ 1
TSR1-201ENST00000301364 USP31Q70CQ4 1352 aa21.28■■□□□ 1
TSR1-201ENST00000301364 GAS7O60861 476 aa21.27■■□□□ 1
TSR1-201ENST00000301364 CCDC170Q8IYT3 715 aa21.27■■□□□ 1
TSR1-201ENST00000301364 POLR1AO95602 1720 aaPredicted RBP21.27■■□□□ 1
TSR1-201ENST00000301364 STK36Q9NRP7 1315 aa21.27■■□□□ 1
TSR1-201ENST00000301364 NPHP4O75161 1426 aaPredicted RBP21.27■■□□□ 1
TSR1-201ENST00000301364 ARL6IP4Q66PJ3 421 aaKnown RBP21.27■■□□□ 1
TSR1-201ENST00000301364 ZNF579Q8NAF0 562 aaKnown RBP21.27■■□□□ 1
TSR1-201ENST00000301364 PAGE5Q96GU1 130 aa21.27■■□□□ 1
TSR1-201ENST00000301364 LMTK3Q96Q04 1460 aa21.27■■□□□ 1
TSR1-201ENST00000301364 NDC80O14777 642 aa21.27■■□□□ 1
TSR1-201ENST00000301364 ATP11AP98196 1134 aa21.27■■□□□ 1
TSR1-201ENST00000301364 BCAS4Q8TDM0 211 aa21.27■■□□□ 1
TSR1-201ENST00000301364 SOS2Q07890 1332 aaPredicted RBP21.27■■□□□ 1
TSR1-201ENST00000301364 FAM98CQ17RN3 349 aaKnown RBP21.27■■□□□ 1
TSR1-201ENST00000301364 FYB2Q5VWT5 728 aa21.27■■□□□ 1
TSR1-201ENST00000301364 PARD6BQ9BYG5 372 aa21.27■■□□□ 1
TSR1-201ENST00000301364 ERCC6L2Q5T890 1561 aa21.27■■□□□ 1
TSR1-201ENST00000301364 A0A1B0GUA9 196 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 CHURC1Q8WUH1 139 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 UIMC1Q96RL1 719 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 STK17AQ9UEE5 414 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 FRMPD2Q68DX3 1309 aaPredicted RBP21.26■□□□□ 0.99
TSR1-201ENST00000301364 CDC42BPGQ6DT37 1551 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 MAN2A1Q16706 1144 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 THAP9Q9H5L6 903 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 SOWAHDA6NJG2 315 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 hCG_1984214I3L0E3 225 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 ZBED6P86452 979 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 TCP10Q12799 353 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 PRR16Q569H4 304 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 MAEAQ7L5Y9 396 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 ZNF713Q8N859 430 aaPredicted RBP21.26■□□□□ 0.99
TSR1-201ENST00000301364 SEC31BQ9NQW1 1179 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 LEMD3Q9Y2U8 911 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 FBXO38Q6PIJ6 1188 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 DPH6Q7L8W6 267 aa21.26■□□□□ 0.99
TSR1-201ENST00000301364 N4BP1O75113 896 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms