RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 E9PMD0 336 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 GLE1Q53GS7 698 aaKnown RBP12.32□□□□□ -0.44
GCN1-201ENST00000300648 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 SIRT1Q96EB6 747 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 UPF3AQ9H1J1 476 aaKnown RBP12.32□□□□□ -0.44
GCN1-201ENST00000300648 BAG2O95816 211 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 PLS1Q14651 629 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 ARHGAP31Q2M1Z3 1444 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 PYGBP11216 843 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 MYCT1Q8N699 235 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 AZI2Q9H6S1 392 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 GTPBP6O43824 516 aaPredicted RBP12.32□□□□□ -0.44
GCN1-201ENST00000300648 TEDDM1Q5T9Z0 273 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 AK8Q96MA6 479 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 VAMP4O75379 141 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 EP400NLQ6ZTU2 488 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 OLFM3Q96PB7 478 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 SPATA1Q5VX52 437 aa12.32□□□□□ -0.44
GCN1-201ENST00000300648 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
GCN1-201ENST00000300648 ARPP21Q9UBL0 812 aaPredicted RBP12.32□□□□□ -0.44
GCN1-201ENST00000300648 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 NOP56O00567 594 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 LONP1P36776 959 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 LIG3P49916 1009 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 NOSTRINQ8IVI9 506 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 SCYL3Q8IZE3 742 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 PAWRQ96IZ0 340 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 RRAGDQ9NQL2 400 aaPredicted RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 TRMT1LQ7Z2T5 733 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 TTC1Q99614 292 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 TAB2Q9NYJ8 693 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 NSFP46459 744 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 TFCP2Q12800 502 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 USHBP1Q8N6Y0 703 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 NDE1Q9NXR1 346 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 SLC5A4Q9NY91 659 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 NOP53Q9NZM5 478 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 DIS3Q9Y2L1 958 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 TNFAIP1Q13829 316 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 PPWD1Q96BP3 646 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 CREB3O43889 395 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 ATP6V1E1P36543 226 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 ATG16L1Q676U5 607 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 NXNQ6DKJ4 435 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 EYA2O00167 538 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 PGRMC1O00264 195 aaKnown RBP12.31□□□□□ -0.44
GCN1-201ENST00000300648 PEX19P40855 299 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 SESN3P58005 492 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 ADCY2Q08462 1091 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 TMCO5AQ8N6Q1 288 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 MGARPQ8TDB4 240 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 NACA2Q9H009 215 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 PDE11AQ9HCR9 933 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
GCN1-201ENST00000300648 CHMP2AO43633 222 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 MBD4O95243 580 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 KRT80Q6KB66 452 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 MMS22LQ6ZRQ5 1243 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 A0A1B0GW55 424 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 DUX4L2P0CJ85 424 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 DUX4L3P0CJ86 424 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 DUX4L4P0CJ87 422 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 DUX4L5P0CJ88 424 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 DUX4L6P0CJ89 424 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 DUX4L7P0CJ90 424 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 LSM14BQ9BX40 385 aaKnown RBP12.3□□□□□ -0.44
GCN1-201ENST00000300648 PICK1Q9NRD5 415 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 DUX4Q9UBX2 424 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 ZNF215Q9UL58 517 aaPredicted RBP12.3□□□□□ -0.44
GCN1-201ENST00000300648 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 EPN1Q9Y6I3 576 aaPredicted RBP12.3□□□□□ -0.44
GCN1-201ENST00000300648 FPGT-TNNI3KV9GXZ4 949 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 KCNA4P22459 653 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 PICALMQ13492 652 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 EXOC8Q8IYI6 725 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 ANKRD42Q8N9B4 389 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 MRGBPQ9NV56 204 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
GCN1-201ENST00000300648 MX2P20592 715 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 MAGEA9P43362 315 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 BICC1Q9H694 974 aaKnown RBP12.3□□□□□ -0.44
GCN1-201ENST00000300648 ATP8A2Q9NTI2 1148 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
GCN1-201ENST00000300648 VGLL3A8MV65 326 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 EEF1DP29692 281 aaKnown RBP12.3□□□□□ -0.44
GCN1-201ENST00000300648 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 YY1AP1Q9H869 796 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 M0QZ92 97 aa12.3□□□□□ -0.44
GCN1-201ENST00000300648 CA8P35219 290 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms