RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 PRPHP41219 470 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 MEX3CQ5U5Q3 659 aaKnown RBP10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 RAD9BQ6WBX8 426 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 SLF2Q8IX21 1173 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 SEPT12Q8IYM1 358 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 TBC1D22AQ8WUA7 517 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 FAM163AQ96GL9 167 aaPredicted RBP10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 PLIN2Q99541 437 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 NAA15Q9BXJ9 866 aaKnown RBP10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 CCSER1Q9C0I3 900 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 VPS16Q9H269 839 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 MRPL44Q9H9J2 332 aaKnown RBP10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 OGFRQ9NZT2 677 aa10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 DDX41Q9UJV9 622 aaKnown RBP10.49□□□□□ -0.73
UBLCP1-201ENST00000296786 SMCO2A6NFE2 343 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 KCNJ18B7U540 433 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 C6orf229H3BNL8 230 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 CCDC175P0C221 793 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 CASQ1P31415 396 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 FXR1P51114 621 aaKnown RBP eCLIP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 COPB1P53618 953 aaKnown RBP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 SPAG1Q07617 926 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 KCNJ12Q14500 433 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 LETM2Q2VYF4 491 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 CREBRFQ8IUR6 639 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 CNGA4Q8IV77 575 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 LRRC15Q8TF66 581 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 RRP36Q96EU6 259 aaKnown RBP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 SRRTQ9BXP5 876 aaKnown RBP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 SEC63Q9UGP8 760 aaKnown RBP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 AFF2P51816 1311 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 TRIM49BA6NDI0 452 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 CCNT1O60563 726 aaKnown RBP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 GNA11P29992 359 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 HOXA10P31260 410 aaPredicted RBP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 DDR1Q08345 913 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 NONOQ15233 471 aaKnown RBP eCLIP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 KRT25Q7Z3Z0 450 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 ADSSL1Q8N142 457 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 MNS1Q8NEH6 495 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 ANKRD20A12PQ8NF67 263 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 PIGSQ96S52 555 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 VAT1LQ9HCJ6 419 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 C6orf50Q9HD87 102 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 KBTBD4Q9NVX7 518 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 TAB2Q9NYJ8 693 aa10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 GREB1LQ9C091 1923 aaPredicted RBP10.48□□□□□ -0.73
UBLCP1-201ENST00000296786 USP17L5A8MUK1 530 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 KLRC4O43908 158 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 MYL1P05976 194 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 TPM1P09493 284 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 OR52Z1P0C646 297 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 GTF2IP78347 998 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 KCNB1Q14721 858 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 ARHGAP29Q52LW3 1261 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 KIFC2Q96AC6 838 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 CARD6Q9BX69 1037 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 DAGLAQ9Y4D2 1042 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 ADGRG1Q9Y653 693 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 POLRMTO00411 1230 aaKnown RBP10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 H2AFXP16104 143 aaPredicted RBP10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 PLCG1P19174 1290 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 NOVP48745 357 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 PMS1P54277 932 aaKnown RBP10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 PICALMQ13492 652 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 TXNRD1Q16881 649 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 NEK8Q86SG6 692 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 CABP7Q86V35 215 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 IRF2BP1Q8IU81 584 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 AK8Q96MA6 479 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 CRAMP1Q96RY5 1269 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 IRX2Q9BZI1 471 aaPredicted RBP10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 UBA5Q9GZZ9 404 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 LZTFL1Q9NQ48 299 aa10.47□□□□□ -0.73
UBLCP1-201ENST00000296786 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 COL11A2P13942 1736 aaPredicted RBP10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 NRXN2Q9P2S2 1712 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 A0A0U1RQJ8 604 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 H7C1D1 291 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 TADA3O75528 432 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 RHOBTB3O94955 611 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 PDHBP11177 359 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 SMARCA1P28370 1054 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 MAP3K9P80192 1104 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 SOGA3Q5TF21 947 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 GIMAP8Q8ND71 665 aaPredicted RBP10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 TBCKQ8TEA7 893 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 ATRIPQ8WXE1 791 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 UBXN4Q92575 508 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 CCDC51Q96ER9 411 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 NUP88Q99567 741 aaPredicted RBP10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 ZMYND15Q9H091 742 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 ABHD10Q9NUJ1 306 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 BIN2Q9UBW5 565 aaPredicted RBP10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 MRFAP1Q9Y605 127 aa10.46□□□□□ -0.73
UBLCP1-201ENST00000296786 FRMPD2Q68DX3 1309 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms