RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 GSCP56915 257 aaPredicted RBP11.44□□□□□ -0.58
LMX1A-201ENST00000294816 CSGALNACT2Q8N6G5 542 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 SHISA4Q96DD7 197 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 MTRQ99707 1265 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 TUBGCP2Q9BSJ2 902 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 GREM2Q9H772 168 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 PPANQ9NQ55 473 aaKnown RBP11.44□□□□□ -0.58
LMX1A-201ENST00000294816 ADAMTSL3P82987 1691 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 E7EVH7 732 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 BMP15O95972 392 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 KRT28Q7Z3Y7 464 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 IRF2BP1Q8IU81 584 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 CREG2Q8IUH2 290 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 PRPF38AQ8NAV1 312 aaKnown RBP11.44□□□□□ -0.58
LMX1A-201ENST00000294816 EXOC1Q9NV70 894 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 STIM2Q9P246 746 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 NFU1Q9UMS0 254 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 TNKSO95271 1327 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 ANO9A1A5B4 782 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 PSMA7O14818 248 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
LMX1A-201ENST00000294816 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 LCORLQ8N3X6 602 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 NOC3LQ8WTT2 800 aaKnown RBP11.44□□□□□ -0.58
LMX1A-201ENST00000294816 SH3GL2Q99962 352 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 GSG1L2A8MUP6 293 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 BUB1O43683 1085 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 LSP1P33241 339 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 NF2P35240 595 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 DNM2P50570 870 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 SF3B2Q13435 895 aaKnown RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 TMTC2Q8N394 836 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 TRIM58Q8NG06 486 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 TTLL11Q8NHH1 800 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 CABLES1Q8TDN4 633 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 MS4A14Q96JA4 679 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 CCDC114Q96M63 670 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 SCLT1Q96NL6 688 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 OSBPL9Q96SU4 736 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 BCCIPQ9P287 314 aaKnown RBP eCLIP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 BAZ2BQ9UIF8 2168 aaKnown RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 ANKRD18BA2A2Z9 1011 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 SMIM22K7EJ46 135 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 GUCY2DQ02846 1103 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 ALS2CLQ60I27 953 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 PDXDC2PQ6P474 469 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 MMGT1Q8N4V1 131 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 ALS2CR12Q96Q35 445 aa11.43□□□□□ -0.58
LMX1A-201ENST00000294816 NOC4LQ9BVI4 516 aaKnown RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 RNF26Q9BY78 433 aaPredicted RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 FAM207AQ9NSI2 230 aaPredicted RBP11.43□□□□□ -0.58
LMX1A-201ENST00000294816 PP2D1A8MPX8 630 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 NR1D1P20393 614 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 PSEN1P49768 467 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 EMBQ6PCB8 327 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 CATIPQ7Z7H3 387 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 ZNF473Q8WTR7 871 aaKnown RBP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 EPB41L5Q9HCM4 733 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 HYOU1Q9Y4L1 999 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 CARSP49589 748 aaKnown RBP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 SF3A3Q12874 501 aaKnown RBP eCLIP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 CEP85LQ5SZL2 805 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 HAUS3Q68CZ6 603 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 TOM1L2Q6ZVM7 507 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 SDR42E1Q8WUS8 393 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 N4BP2L2Q92802 583 aaPredicted RBP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 PHF20Q9BVI0 1012 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 RBM12Q9NTZ6 932 aaKnown RBP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 GOLGA6L7A0A1B0GV03 622 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 FRMD3A2A2Y4 597 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 BACH1O14867 736 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 FAM153BP0C7A2 387 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 SCP2P22307 547 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 ZBED6P86452 979 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 ATP2C1P98194 919 aaPredicted RBP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 HLTFQ14527 1009 aaKnown RBP eCLIP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 FAM153CQ494X1 144 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 CCDC40Q4G0X9 1142 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
LMX1A-201ENST00000294816 TSGA10Q9BZW7 698 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 MMRN2Q9H8L6 949 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 DONSONQ9NYP3 566 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 LRP2BPQ9P2M1 347 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 FAM153AQ9UHL3 310 aa11.42□□□□□ -0.58
LMX1A-201ENST00000294816 ARFGEF2Q9Y6D5 1785 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 CHUKO15111 745 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 HEXIM1O94992 359 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 EEF1GP26641 437 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ENOX2Q16206 610 aaKnown RBP11.41□□□□□ -0.58
LMX1A-201ENST00000294816 PKN1Q16512 942 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 KIF6Q6ZMV9 814 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 CCDC121Q6ZUS5 278 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
LMX1A-201ENST00000294816 SPATA5Q8NB90 893 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms