RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 PHEXP78562 749 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 SKA2Q8WVK7 121 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-202ENST00000293880 CSPG5O95196 566 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 LRRC47Q8N1G4 583 aaKnown RBP17.67■□□□□ 0.42
SSRP1-202ENST00000293880 SDR42E1Q8WUS8 393 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 ZMYM4Q5VZL5 1548 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 KRT3P12035 628 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 SMYD4Q8IYR2 804 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-202ENST00000293880 TRIM58Q8NG06 486 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 N4BP2L2Q92802 583 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-202ENST00000293880 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.67■□□□□ 0.42
SSRP1-202ENST00000293880 SLC4A7Q9Y6M7 1214 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 XRCC5P13010 732 aaKnown RBP17.67■□□□□ 0.42
SSRP1-202ENST00000293880 CXCR5P32302 372 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 HVCN1Q96D96 273 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 PRAG1Q86YV5 1406 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 SLC4A1P02730 911 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 PALD1Q9ULE6 856 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 hCG_2014768A0A024R1R8 64 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 PDE6CP51160 858 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 HP1BP3Q5SSJ5 553 aaPredicted RBP17.66■□□□□ 0.42
SSRP1-202ENST00000293880 HDAC11Q96DB2 347 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 TRPA1O75762 1119 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 GSPT1P15170 499 aaKnown RBP17.66■□□□□ 0.42
SSRP1-202ENST00000293880 ECE1P42892 770 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 BIRC2Q13490 618 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 FAM71BQ8TC56 605 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 LRGUKQ96M69 825 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 PDE8AO60658 829 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 USP28Q96RU2 1077 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 VCX3AQ9NNX9 186 aa17.66■□□□□ 0.42
SSRP1-202ENST00000293880 EIF4E1BA6NMX2 242 aaKnown RBP17.65■□□□□ 0.42
SSRP1-202ENST00000293880 ZBED4O75132 1171 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 NUDCD3Q8IVD9 361 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 KIAA1468Q9P260 1216 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 EHHADHQ08426 723 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 MCUQ8NE86 351 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 LRRC8CQ8TDW0 803 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 SYMPKQ92797 1274 aaKnown RBP17.65■□□□□ 0.42
SSRP1-202ENST00000293880 A0A0D9SFI3 127 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 GRK7Q8WTQ7 553 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 DCAF5Q96JK2 942 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 SGK1O00141 431 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 CACNB1Q02641 598 aaPredicted RBP17.65■□□□□ 0.42
SSRP1-202ENST00000293880 RBL2Q08999 1139 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 TMED2Q15363 201 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 RFX6Q8HWS3 928 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 GCP02774 474 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 RPN1P04843 607 aaKnown RBP17.65■□□□□ 0.42
SSRP1-202ENST00000293880 PIK3CAP42336 1068 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 ARHGEF16Q5VV41 709 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 IFT122Q9HBG6 1241 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 RIC8AQ9NPQ8 531 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 TRPM2O94759 1503 aa17.65■□□□□ 0.42
SSRP1-202ENST00000293880 GAS7O60861 476 aa17.64■□□□□ 0.42
SSRP1-202ENST00000293880 STAT1P42224 750 aa17.64■□□□□ 0.42
SSRP1-202ENST00000293880 RAPH1Q70E73 1250 aa17.64■□□□□ 0.42
SSRP1-202ENST00000293880 MYOCDQ8IZQ8 938 aa17.64■□□□□ 0.42
SSRP1-202ENST00000293880 ABCF3Q9NUQ8 709 aa17.64■□□□□ 0.42
SSRP1-202ENST00000293880 PHLDB3Q6NSJ2 640 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 DPP8Q6V1X1 898 aaPredicted RBP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 GABPB2Q8TAK5 448 aaPredicted RBP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 DEPTORQ8TB45 409 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 NUP153P49790 1475 aaKnown RBP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 ESYT2A0FGR8 921 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 YWHAGP61981 247 aaKnown RBP eCLIP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 FAM98CQ17RN3 349 aaKnown RBP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 DUOX2Q9NRD8 1548 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 A6NNZ2 444 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 EFCAB8A8MWE9 144 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 TRIP13Q15645 432 aaPredicted RBP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 TUBB8Q3ZCM7 444 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 ZNF790Q6PG37 636 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 SLC35F6Q8N357 371 aa17.64■□□□□ 0.41
SSRP1-202ENST00000293880 RRP15Q9Y3B9 282 aaKnown RBP17.64■□□□□ 0.41
SSRP1-202ENST00000293880 RNF8O76064 485 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 CASP14P31944 242 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 LIG4P49917 911 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 GRAMD1CQ8IYS0 662 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 CHMP6Q96FZ7 201 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 ORAI2Q96SN7 254 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 TBK1Q9UHD2 729 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 UBXN2AP68543 259 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 ZSCAN10Q96SZ4 725 aaPredicted RBP17.63■□□□□ 0.41
SSRP1-202ENST00000293880 DDX25Q9UHL0 483 aaKnown RBP17.63■□□□□ 0.41
SSRP1-202ENST00000293880 MOCS3O95396 460 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 OATP04181 439 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 SLCO1A2P46721 670 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 IGBP1P78318 339 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 REXO1Q8N1G1 1221 aaKnown RBP17.63■□□□□ 0.41
SSRP1-202ENST00000293880 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 GOLGA5Q8TBA6 731 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 MAIP1Q8WWC4 291 aa17.63■□□□□ 0.41
SSRP1-202ENST00000293880 G3BP2Q9UN86 482 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms