RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 APBA3O96018 575 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 LONRF3Q496Y0 759 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 U2AF1L4Q8WU68 220 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 DAPK3O43293 454 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 PRPF6O94906 941 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 COPB1P53618 953 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 IRX3P78415 501 aaPredicted RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 LONRF2Q1L5Z9 754 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 USPL1Q5W0Q7 1092 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 IPO4Q8TEX9 1081 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 HAUS2Q9NVX0 235 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 ABCC12Q96J65 1359 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 FRMPD2Q68DX3 1309 aaPredicted RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 UAP1Q16222 522 aaPredicted RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 ARHGEF16Q5VV41 709 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 P3H4Q92791 437 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 TNNI1P19237 187 aa14.08□□□□□ -0.15
PTCD1-201ENST00000292478 SH2B2O14492 632 aaPredicted RBP14.08□□□□□ -0.16
PTCD1-201ENST00000292478 IFNAR1P17181 557 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 CA8P35219 290 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 ARHGAP44Q17R89 818 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 ZNF589Q86UQ0 364 aaPredicted RBP14.08□□□□□ -0.16
PTCD1-201ENST00000292478 HACE1Q8IYU2 909 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 MIS12Q9H081 205 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 BBOX1O75936 387 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 GBP1P32455 592 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 ATP11AP98196 1134 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 KIF23Q02241 960 aaPredicted RBP14.08□□□□□ -0.16
PTCD1-201ENST00000292478 AOC3Q16853 763 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 ZBTB8OSQ8IWT0 167 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 AFAP1L2Q8N4X5 818 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 GPKOWQ92917 476 aaPredicted RBP eCLIP14.08□□□□□ -0.16
PTCD1-201ENST00000292478 RNF34Q969K3 372 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 AMNQ9BXJ7 453 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 ASAP1Q9ULH1 1129 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 OAS2P29728 719 aaKnown RBP14.08□□□□□ -0.16
PTCD1-201ENST00000292478 LIFRP42702 1097 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 DENND2CQ68D51 928 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 NLRP10Q86W26 655 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 FAM178BQ8IXR5 827 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 ODF2LQ9ULJ1 636 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
PTCD1-201ENST00000292478 CD19P15391 556 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 CEP57Q86XR8 500 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 GPATCH11Q8N954 259 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 STMN2Q93045 179 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 BCL2L12Q9HB09 334 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 ZBTB1Q9Y2K1 713 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 GOLGA8KD6RF30 607 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
PTCD1-201ENST00000292478 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 LRRC47Q8N1G4 583 aaKnown RBP14.07□□□□□ -0.16
PTCD1-201ENST00000292478 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 TRIM31Q9BZY9 425 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 RIC8AQ9NPQ8 531 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 SLC5A4Q9NY91 659 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 EPN1Q9Y6I3 576 aaPredicted RBP14.07□□□□□ -0.16
PTCD1-201ENST00000292478 CDC42BPGQ6DT37 1551 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 PRPF3O43395 683 aaKnown RBP14.07□□□□□ -0.16
PTCD1-201ENST00000292478 MMP1P03956 469 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 GAP43P17677 238 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 ADAM9Q13443 819 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 RSRC1Q96IZ7 334 aaKnown RBP14.07□□□□□ -0.16
PTCD1-201ENST00000292478 RABGAP1Q9Y3P9 1069 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 INPP5BP32019 993 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 APBA1Q02410 837 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 ABCB5Q2M3G0 1257 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 HHATQ5VTY9 493 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 LINC00301Q8NCQ3 95 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 USTQ9Y2C2 406 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 CYP2J2P51589 502 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 FAM102BQ5T8I3 360 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 CCDC125Q86Z20 511 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 SIRT2Q8IXJ6 389 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 STK17AQ9UEE5 414 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 NOD1Q9Y239 953 aa14.07□□□□□ -0.16
PTCD1-201ENST00000292478 TTLL1O95922 423 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 PABPC4Q13310 644 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTCD1-201ENST00000292478 BAG6P46379 1132 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 NECTIN1Q15223 517 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 PPP1R21Q6ZMI0 780 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 PI4K2BQ8TCG2 481 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 PCDHA1Q9Y5I3 950 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 RFX7Q2KHR2 1363 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 H7C1W4 665 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 K7ENM7 598 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 M0QZ92 97 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 DTNBO60941 627 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 H2AFZP0C0S5 128 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 SEPT2Q15019 361 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 H2AFVQ71UI9 128 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 ARHGAP24Q8N264 748 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 C1orf112Q9NSG2 853 aa14.06□□□□□ -0.16
PTCD1-201ENST00000292478 DDX41Q9UJV9 622 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms