RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 KRT40Q6A162 431 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 RIC8AQ9NPQ8 531 aa11.81□□□□□ -0.52
PKNOX1-201ENST00000291547 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 PPP1R12AO14974 1030 aaPredicted RBP11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 ARHGAP44Q17R89 818 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 NXNQ6DKJ4 435 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 ZNF710Q8N1W2 664 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 KRT12Q99456 494 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 DPH5Q9H2P9 285 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 NSFL1CQ9UNZ2 370 aaKnown RBP11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 CPS1P31327 1500 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 FAM170AA1A519 330 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 GABPAQ06546 454 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 MAEAQ7L5Y9 396 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 PDE11AQ9HCR9 933 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 JAG2Q9Y219 1238 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 U2AF1L4Q8WU68 220 aaKnown RBP11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 STRN3Q13033 797 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 SRLQ86TD4 932 aa11.8□□□□□ -0.52
PKNOX1-201ENST00000291547 IRS4O14654 1257 aaPredicted RBP11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 ABCB4P21439 1286 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 SERPINB6P35237 376 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 TIMM10P62072 90 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 NCAPH2Q6IBW4 605 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 PDZD8Q8NEN9 1154 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 BLZF1Q9H2G9 400 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 PPP2R2CQ9Y2T4 447 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 KAT6BQ8WYB5 2073 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 HOXB7P09629 217 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 PHKG2P15735 406 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 E2F5Q15329 346 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 SH3GL3Q99963 347 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 CARD10Q9BWT7 1032 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 PRDM1O75626 825 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 ADCY8P40145 1251 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 NONOQ15233 471 aaKnown RBP eCLIP11.79□□□□□ -0.526e-7■■■■■ 34
PKNOX1-201ENST00000291547 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 CAPN12Q6ZSI9 719 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 RSPH3Q86UC2 560 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 PHKBQ93100 1093 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 NBPF3Q9H094 633 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 USP21Q9UK80 565 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 SGSM2O43147 1006 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 TCP1P17987 556 aaKnown RBP11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 IFT88Q13099 833 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 PNOCQ13519 176 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 TTC19Q6DKK2 380 aaPredicted RBP11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 GPT2Q8TD30 523 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 IQCDQ96DY2 449 aa11.79□□□□□ -0.52
PKNOX1-201ENST00000291547 JAK2O60674 1132 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 STAT1P42224 750 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 MYCT1Q8N699 235 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 DNM3Q9UQ16 869 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 PHBP35232 272 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 PTPROQ16827 1216 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 KCTD16Q68DU8 428 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 RSAD2Q8WXG1 361 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 ANKFY1Q9P2R3 1169 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 GCNT3O95395 438 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 FAM98CQ17RN3 349 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 SPDL1Q96EA4 605 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 FAM227BQ96M60 508 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 HINFPQ9BQA5 517 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 HAUS4Q9H6D7 363 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 THAP12O43422 761 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 DNAJC8O75937 253 aaPredicted RBP11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 SUN1O94901 812 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 CDC25BP30305 580 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 TCP11Q8WWU5 503 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 MRPL46Q9H2W6 279 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 BAG5Q9UL15 447 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 PYCARDQ9ULZ3 195 aa11.78□□□□□ -0.52
PKNOX1-201ENST00000291547 ZBTB7BO15156 539 aaPredicted RBP11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 IFNAR2P48551 515 aa11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 NBPF14Q5TI25 921 aa11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 TADA2BQ86TJ2 420 aa11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 CABP7Q86V35 215 aa11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 HAUS8Q9BT25 410 aa11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 KCNJ14Q9UNX9 436 aa11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 GINS2Q9Y248 185 aa11.77□□□□□ -0.52
PKNOX1-201ENST00000291547 PNPLA6Q8IY17 1366 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 BRD1O95696 1058 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 INPP1P49441 399 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 PHEXP78562 749 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 KRT25Q7Z3Z0 450 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 NSMCE1Q8WV22 266 aa11.77□□□□□ -0.53
PKNOX1-201ENST00000291547 NLRP7Q8WX94 980 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms