RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 COA7Q96BR5 231 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 GBA2Q9HCG7 927 aaPredicted RBP13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 FAM205CA6NFA0 338 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 NOLC1Q14978 699 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 C8orf76Q96K31 380 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 FTOQ9C0B1 505 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
CHRNB3-201ENST00000289957 PRPF3O43395 683 aaKnown RBP13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 CAVIN2O95810 425 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 NPY5RQ15761 445 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 EARS2Q5JPH6 523 aaKnown RBP13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 KRT40Q6A162 431 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 CLSTN2Q9H4D0 955 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 RPAP3Q9H6T3 665 aaPredicted RBP13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 CDKL5O76039 1030 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 NR5A1Q13285 461 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 RASGRP4Q8TDF6 673 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 WDR18Q9BV38 432 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
CHRNB3-201ENST00000289957 STK36Q9NRP7 1315 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 DEXIO95424 95 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 SCG2P13521 617 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 YY1P25490 414 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 TYRO3Q06418 890 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 RESTQ13127 1097 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 PFKFB3Q16875 520 aaPredicted RBP13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 FBXO18Q8NFZ0 1043 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 MRVI1Q9Y6F6 885 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 H3BQV1 296 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 QRICH1Q2TAL8 776 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 USH1GQ495M9 461 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 KIAA1524Q8TCG1 905 aa13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 LEO1Q8WVC0 666 aaPredicted RBP13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 ZSCAN16Q9H4T2 348 aaPredicted RBP13.14□□□□□ -0.31
CHRNB3-201ENST00000289957 HTTP42858 3142 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 RLFQ13129 1914 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 PASKQ96RG2 1323 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 SPDYE5A6NIY4 337 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 STXBP3O00186 592 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 STAT2P52630 851 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 MOGSQ13724 837 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 WNT7AO00755 349 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 FLOT1O75955 427 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 LIG1P18858 919 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 TPRNQ4KMQ1 711 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 GADL1Q6ZQY3 521 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 ERO1BQ86YB8 467 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 SLC10A4Q96EP9 437 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 R3HDMLQ9H3Y0 253 aa13.13□□□□□ -0.31
CHRNB3-201ENST00000289957 PARP14Q460N5 1801 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 AP5Z1O43299 807 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 CDC25BP30305 580 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 HUNKP57058 714 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 ATG4CQ96DT6 458 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 RRP36Q96EU6 259 aaKnown RBP13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 SPATA32Q96LK8 384 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 TRPM7Q96QT4 1865 aa13.12□□□□□ -0.31
CHRNB3-201ENST00000289957 GNAQP50148 359 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 HTRA3P83110 453 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 TNMDQ9H2S6 317 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 KCNF1Q9H3M0 494 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 TTC12Q9H892 705 aaPredicted RBP13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 ZBTB5O15062 677 aa13.11□□□□□ -0.31
CHRNB3-201ENST00000289957 MMP1P03956 469 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms