RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 PDE6AP16499 860 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 GALNT17Q6IS24 598 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 NBPF10Q6P3W6 841 aaKnown RBP19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 RABEP2Q9H5N1 569 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 SYNCQ9H7C4 482 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 BAG6P46379 1132 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 TYW1BQ6NUM6 668 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 PI4K2BQ8TCG2 481 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 E9PCH4 1651 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 QRICH2Q9H0J4 1663 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 KRIT1O00522 736 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 MUM1L1Q5H9M0 696 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 TRMT1LQ7Z2T5 733 aaKnown RBP19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 NOP53Q9NZM5 478 aaKnown RBP19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 CYP21A2P08686 494 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 CLTAP09496 248 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 BCRP11274 1271 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 EIF6P56537 245 aaKnown RBP19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 PPARAQ07869 468 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 KMT5BQ4FZB7 885 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 ZNF654Q8IZM8 581 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 NCAPGQ9BPX3 1015 aa19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 JPH2Q9BR39 696 aaPredicted RBP19.25■□□□□ 0.67
PCDHA13-201ENST00000289272 ANKARQ7Z5J8 1434 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 HSPA6P17066 643 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 IFNL3Q8IZI9 196 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 AATFQ9NY61 560 aaKnown RBP eCLIP19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 STK38LQ9Y2H1 464 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 GUCY2FP51841 1108 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 C10orf76Q5T2E6 689 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 RRAGAQ7L523 313 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 ZNF589Q86UQ0 364 aaPredicted RBP19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 CCDC105Q8IYK2 499 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 SCOCQ9UIL1 159 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 GUCY2CP25092 1073 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 PICK1Q9NRD5 415 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 LRRIQ1Q96JM4 1722 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 CTIFO43310 598 aaKnown RBP19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 PHBP35232 272 aa19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 SAP30BPQ9UHR5 308 aaKnown RBP19.24■□□□□ 0.67
PCDHA13-201ENST00000289272 ADD1P35611 737 aaKnown RBP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 TPD52P55327 224 aaPredicted RBP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 DCAF17Q5H9S7 520 aaPredicted RBP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 NUF2Q9BZD4 464 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 NT5C3AQ9H0P0 336 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 ANO9A1A5B4 782 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 SKIP12755 728 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 DYNC1I2Q13409 638 aaKnown RBP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 CUL1Q13616 776 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 PBKQ96KB5 322 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 ABCB6Q9NP58 842 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 INTS9Q9NV88 658 aaKnown RBP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 LONP1P36776 959 aaKnown RBP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 TRAPPC10P48553 1259 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 NONOQ15233 471 aaKnown RBP eCLIP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 LRRC23Q53EV4 343 aaPredicted RBP19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 VIPAS39Q9H9C1 493 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 VPS54Q9P1Q0 977 aa19.23■□□□□ 0.67
PCDHA13-201ENST00000289272 RPS8P62241 208 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 UBE3CQ15386 1083 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 RBM26Q5T8P6 1007 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 RPUSD2Q8IZ73 545 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 TRIM6Q9C030 488 aaPredicted RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 KDM3AQ9Y4C1 1321 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 IL9RQ01113 521 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 SDCCAG8Q86SQ7 713 aaPredicted RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 DDX27Q96GQ7 796 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 DDX23Q9BUQ8 820 aaKnown RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 CTTNBP2NLQ9P2B4 639 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 MAPK8IP1Q9UQF2 711 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 NR1D1P20393 614 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 NNTQ13423 1086 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 RASIP1Q5U651 963 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 FAM169AQ9Y6X4 670 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 A2ML1A8K2U0 1454 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 KRT15P19012 456 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 LONRF3Q496Y0 759 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 SAAL1Q96ER3 474 aa19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 DHTKD1Q96HY7 919 aaPredicted RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 FOXP1Q9H334 677 aaPredicted RBP19.22■□□□□ 0.67
PCDHA13-201ENST00000289272 PRAMEF22A3QJZ6 481 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 GMNNO75496 209 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 ATP5HO75947 161 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 CABP7Q86V35 215 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 YY1AP1Q9H869 796 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 ARPP21Q9UBL0 812 aaPredicted RBP19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 CASP14P31944 242 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 RESTQ13127 1097 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 SRLQ86TD4 932 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 ALKQ9UM73 1620 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 CCNT1O60563 726 aaKnown RBP19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 BIRC3Q13489 604 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 PPP2R5AQ15172 486 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 NSUN7Q8NE18 718 aaKnown RBP19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 MED23Q9ULK4 1368 aa19.21■□□□□ 0.67
PCDHA13-201ENST00000289272 LAD1O00515 517 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms