RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CENPFP49454 3210 aa11.64□□□□□ -0.55
SKA1-201ENST00000285116 LOC102724159A0A0B4J2E5 919 aa11.64□□□□□ -0.55
SKA1-201ENST00000285116 WNT7AO00755 349 aa11.64□□□□□ -0.55
SKA1-201ENST00000285116 SCG2P13521 617 aa11.64□□□□□ -0.55
SKA1-201ENST00000285116 PWP2Q15269 919 aaKnown RBP11.64□□□□□ -0.55
SKA1-201ENST00000285116 DAGLBQ8NCG7 672 aa11.64□□□□□ -0.55
SKA1-201ENST00000285116 RPGRIP1Q96KN7 1286 aa11.64□□□□□ -0.55
SKA1-201ENST00000285116 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
SKA1-201ENST00000285116 KCNJ18B7U540 433 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 SNAP23O00161 211 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 N4BP3O15049 544 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 KCNJ12Q14500 433 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 MEA1Q16626 185 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 GALNT17Q6IS24 598 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 CCDC91Q7Z6B0 441 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 MIGA1Q8NAN2 632 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 ZNF507Q8TCN5 953 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 IQCDQ96DY2 449 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 HAUS4Q9H6D7 363 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 LGALS16A8MUM7 142 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 LAD1O00515 517 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 PRPF6O94906 941 aaKnown RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 RPN1P04843 607 aaKnown RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 SF3B3Q15393 1217 aaKnown RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 IL17AQ16552 155 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 MAP9Q49MG5 647 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 COBLL1Q53SF7 1204 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 TRAPPC11Q7Z392 1133 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 ADSSL1Q8N142 457 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 RETREG2Q8NC44 543 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 CCDC148Q8NFR7 591 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 NELFBQ8WX92 580 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 TARSL2A2RTX5 802 aaKnown RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 M0R2N6 131 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 SYF2O95926 243 aaKnown RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 HOXA7P31268 230 aaPredicted RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 CDK17Q00537 523 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 RRAGBQ5VZM2 374 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 KLHL10Q6JEL2 608 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 SDR42E1Q8WUS8 393 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 RUBCNQ92622 972 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 CDCA7Q9BWT1 371 aaPredicted RBP11.63□□□□□ -0.55
SKA1-201ENST00000285116 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 CAPN11Q9UMQ6 739 aa11.63□□□□□ -0.55
SKA1-201ENST00000285116 TNRC6CQ9HCJ0 1690 aaKnown RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 A0A0U1RQJ8 604 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 ANKRD65E5RJM6 399 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 PRPHP41219 470 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 PPP1R2P41236 205 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 MMP14P50281 582 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 STX17P56962 302 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 ZNF174Q15697 407 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 PAPD7Q5XG87 772 aaKnown RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 IRF2BP1Q8IU81 584 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 EHBP1Q8NDI1 1231 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 ATRIPQ8WXE1 791 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 CCSER1Q9C0I3 900 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 BSDC1Q9NW68 430 aaPredicted RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 ROBO3Q96MS0 1386 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 NDUFA10O95299 355 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 POTEAQ6S8J7 498 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 MICALL1Q8N3F8 863 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 NOA1Q8NC60 698 aaKnown RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 OR8K1Q8NGG5 319 aa11.62□□□□□ -0.55
SKA1-201ENST00000285116 SMARCC1Q92922 1105 aaPredicted RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 REXO2Q9Y3B8 237 aaKnown RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 EPN1Q9Y6I3 576 aaPredicted RBP11.62□□□□□ -0.55
SKA1-201ENST00000285116 PRDM1O75626 825 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 KIF5BP33176 963 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 ITPK1Q13572 414 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 FIGNQ5HY92 759 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 MB21D1Q8N884 522 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 ACRBPQ8NEB7 543 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 NUP58Q9BVL2 599 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 PLEKHA4Q9H4M7 779 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
SKA1-201ENST00000285116 DDX60LQ5H9U9 1706 aaKnown RBP11.61□□□□□ -0.55
SKA1-201ENST00000285116 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 SHOX2O60902 331 aaPredicted RBP11.61□□□□□ -0.55
SKA1-201ENST00000285116 ERLIN2O94905 339 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 CCDC178Q5BJE1 867 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 FBXO33Q7Z6M2 555 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 SMYD4Q8IYR2 804 aaPredicted RBP11.61□□□□□ -0.55
SKA1-201ENST00000285116 ZNF384Q8TF68 577 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 CPLX3Q8WVH0 158 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 DISC1Q9NRI5 854 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 SRP68Q9UHB9 627 aaKnown RBP11.61□□□□□ -0.55
SKA1-201ENST00000285116 HPCAL4Q9UM19 191 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 NAV1Q8NEY1 1877 aa11.61□□□□□ -0.55
SKA1-201ENST00000285116 PARP1P09874 1014 aaKnown RBP11.6□□□□□ -0.55
SKA1-201ENST00000285116 CASP1P29466 404 aa11.6□□□□□ -0.55
SKA1-201ENST00000285116 KRT9P35527 623 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms