RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 GPC4O75487 556 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 TTC4O95801 387 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ZSCAN20P17040 1043 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 CIITAP33076 1130 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SURF1Q15526 300 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 CDC37Q16543 378 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 FASTKD5Q7L8L6 764 aaKnown RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 DHX38Q92620 1227 aaKnown RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 FAM167AQ96KS9 214 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 DSCC1Q9BVC3 393 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 TEX12Q9BXU0 123 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 CLSTN2Q9H4D0 955 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 MYL1P05976 194 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 CA4P22748 312 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 RPS6KB1P23443 525 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 PPARAQ07869 468 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 PSMD6Q15008 389 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ARL13BQ3SXY8 428 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SEPT14Q6ZU15 432 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 TPH2Q8IWU9 490 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 KANSL2Q9H9L4 492 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SUGCTQ9HAC7 445 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 B4E1Z4 1266 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 RHOXF2BP0C7M4 288 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ALAS1P13196 640 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 GCKRQ14397 625 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 HSP90AA5PQ58FG0 334 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 KRT40Q6A162 431 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 ARMCX5Q6P1M9 558 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 SIX6OS1Q8N1H7 587 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 RHOXF2Q9BQY4 288 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 LARP6Q9BRS8 491 aaKnown RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 EFHD1Q9BUP0 239 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 WDR11Q9BZH6 1224 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 TRIM45Q9H8W5 580 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 NFE2L3Q9Y4A8 694 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 MAP3K19Q56UN5 1328 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 BUB1BO60566 1050 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-201ENST00000283254 HSPA6P17066 643 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 IQCB1Q15051 598 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 USH1GQ495M9 461 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 MMS19Q96T76 1030 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 USP40Q9NVE5 1235 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 POLKQ9UBT6 870 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 PCDHA1Q9Y5I3 950 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 KDRP35968 1356 aa4.45□□□□□ -1.7
SCN3A-201ENST00000283254 GOLGA4Q13439 2230 aaKnown RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 IRX5P78411 483 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 COG7P83436 770 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ZYXQ15942 572 aaKnown RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ARMC9Q7Z3E5 817 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ELMOD1Q8N336 334 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 HDAC11Q96DB2 347 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 MAST1Q9Y2H9 1570 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 TMCC1O94876 653 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 TBC1D8O95759 1140 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 FAM102BQ5T8I3 360 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 NUDT18Q6ZVK8 323 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 C2CD5Q86YS7 1000 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 NOSTRINQ8IVI9 506 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ARHGEF2Q92974 986 aaKnown RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ZSCAN10Q96SZ4 725 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ARMT1Q9H993 441 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 EPS15L1Q9UBC2 864 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 WDR62O43379 1518 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ABCC2Q92887 1545 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ATP10AO60312 1499 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 CCDC151A5D8V7 595 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 CHEK2O96017 543 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ARL4AP40617 200 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 PTK2Q05397 1052 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ABCB5Q2M3G0 1257 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ASPRV1Q53RT3 343 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 NEK8Q86SG6 692 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ZBTB33Q86T24 672 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 CABS1Q96KC9 395 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 SNX25Q9H3E2 840 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 A0A1W2PP64 1363 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 MYO3BQ8WXR4 1341 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ARHGAP42A6NI28 874 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 LRRIQ4A6NIV6 560 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 CLGNO14967 610 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 SART1O43290 800 aaKnown RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 OR52Z1P0C646 297 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 INPP1P49441 399 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 PRR16Q569H4 304 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 RNF219Q5W0B1 726 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 TSC1Q92574 1164 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 CHMP6Q96FZ7 201 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 NT5C1BQ96P26 610 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 EYA1Q99502 592 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 VPS18Q9P253 973 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 MED7O43513 233 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 DDX5P17844 614 aaKnown RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 PDE1BQ01064 536 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 ITKQ08881 620 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 WHAMMP3Q1A5X7 153 aa4.44□□□□□ -1.7
SCN3A-201ENST00000283254 JARID2Q92833 1246 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-201ENST00000283254 INO80BQ9C086 356 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms