RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CREB3O43889 395 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 KRT8P05787 483 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 GLE1Q53GS7 698 aaKnown RBP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 USP26Q9BXU7 913 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 SAP30BPQ9UHR5 308 aaKnown RBP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 PPARDQ03181 441 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 OCA2Q04671 838 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 USP6NLQ92738 828 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 JARID2Q92833 1246 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ZFYVE9O95405 1425 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 DDX39AO00148 427 aaKnown RBP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 MCF2P10911 925 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 TXKP42681 527 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ARHGAP44Q17R89 818 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 EFCAB13Q8IY85 973 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 OR9Q1Q8NGQ5 310 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ADPGKQ9BRR6 497 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ITM2BQ9Y287 266 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 EFCAB8A8MWE9 144 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 C11orf95C9JLR9 678 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 CYP2J2P51589 502 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ARHGDIAP52565 204 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 MORC3Q14149 939 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 GFAPP14136 432 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 NFKBIAP25963 317 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 PIK3CAP42336 1068 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 MYLK4Q86YV6 388 aaPredicted RBP9.51□□□□□ -0.89
NIPBL-201ENST00000282516 CNBD1Q8NA66 436 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 MEIS3Q99687 375 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ZNF212Q9UDV6 495 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 MAP3K5Q99683 1374 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 BPIFB4P59827 614 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ZBTB18Q99592 522 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 MID2Q9UJV3 735 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 ADGRL1O94910 1474 aa9.51□□□□□ -0.89
NIPBL-201ENST00000282516 GPBP1Q86WP2 473 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 GLG1Q92896 1179 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 CBX8Q9HC52 389 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 ABCB4P21439 1286 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 LINS1Q8NG48 757 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 VGLL3A8MV65 326 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 PLCH2O75038 1416 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 TFCP2Q12800 502 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.5□□□□□ -0.89
NIPBL-201ENST00000282516 LZICQ8WZA0 190 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 UFL1O94874 794 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 TCP1P17987 556 aaKnown RBP9.5□□□□□ -0.89
NIPBL-201ENST00000282516 MCUQ8NE86 351 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 UBN1Q9NPG3 1134 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 ENOX1Q8TC92 643 aaKnown RBP9.5□□□□□ -0.89
NIPBL-201ENST00000282516 KIF17Q9P2E2 1029 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 RTCBQ9Y3I0 505 aaKnown RBP9.5□□□□□ -0.89
NIPBL-201ENST00000282516 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
NIPBL-201ENST00000282516 SLC12A1Q13621 1099 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 COPS6Q7L5N1 327 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 POLE3Q9NRF9 147 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 POLKQ9UBT6 870 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 KRT4P19013 534 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 TMCC1O94876 653 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 GNL1P36915 607 aaPredicted RBP9.5□□□□□ -0.89
NIPBL-201ENST00000282516 ARHGEF18Q6ZSZ5 1173 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 DACH2Q96NX9 599 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
NIPBL-201ENST00000282516 K7ENM7 598 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 PMLP29590 882 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 SPOPLQ6IQ16 392 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 NLRX1Q86UT6 975 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 OR8K1Q8NGG5 319 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 FAM193BQ96PV7 902 aaPredicted RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 ARMCX3Q9UH62 379 aaPredicted RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 CDK13Q14004 1512 aaKnown RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 IFT140Q96RY7 1462 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 RASGRF2O14827 1237 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MCF2LO15068 1137 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 FOXO3O43524 673 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 LIG4P49917 911 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 SCYL2Q6P3W7 929 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MRC2Q9UBG0 1479 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 SYCE1LA8MT33 242 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 WDR64B1ANS9 1081 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 H7C0C1 242 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 PYGBP11216 843 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 ATP5OP48047 213 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 SLFN12Q8IYM2 578 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MTBPQ96DY7 904 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MAGEF1Q9HAY2 307 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 KDM5AP29375 1690 aaKnown RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 OCM2P0CE71 109 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 OCMP0CE72 109 aaPredicted RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 ZCRB1Q8TBF4 217 aaKnown RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 BCAS4Q8TDM0 211 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 INTS9Q9NV88 658 aaKnown RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 MAGI1Q96QZ7 1491 aaPredicted RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 HLA-DPA1P20036 260 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 AOC3Q16853 763 aa9.49□□□□□ -0.89
NIPBL-201ENST00000282516 CCDC92Q53HC0 331 aaPredicted RBP9.49□□□□□ -0.89
NIPBL-201ENST00000282516 TPH2Q8IWU9 490 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms