RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 BAZ2BQ9UIF8 2168 aaKnown RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 MBD4O95243 580 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 LIFRP42702 1097 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 COPB1P53618 953 aaKnown RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 ZNF174Q15697 407 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 RRAGBQ5VZM2 374 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 TTC19Q6DKK2 380 aaPredicted RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 KANK3Q6NY19 840 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 CYP26C1Q6V0L0 522 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 IFNL3Q8IZI9 196 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 CRACR2BQ8N4Y2 399 aaPredicted RBP12.75□□□□□ -0.37
SCLT1-201ENST00000281142 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
SCLT1-201ENST00000281142 TCRBV5S4A2TA0A5A2 114 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 AGPSO00116 658 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 PDE2AO00408 941 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-201ENST00000281142 CLGNO14967 610 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 NAPBQ9H115 298 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 NDUFA10O95299 355 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 HOXA10P31260 410 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-201ENST00000281142 HERVK_113P62684 666 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 C2CD5Q86YS7 1000 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 KAT2BQ92831 832 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 EEF2KMTQ96G04 330 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 MTRQ99707 1265 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
SCLT1-201ENST00000281142 EPN1Q9Y6I3 576 aaPredicted RBP12.74□□□□□ -0.37
SCLT1-201ENST00000281142 TRIM49BA6NDI0 452 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 RCCD1A6NED2 376 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 CCT5P48643 541 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 AARSP49588 968 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 TUBB2AQ13885 445 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 SUGP1Q8IWZ8 645 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 MICALL1Q8N3F8 863 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 TUBB2BQ9BVA1 445 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 AATFQ9NY61 560 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 TTC26A0AVF1 554 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 TRIM75PA6NK02 468 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 LIG3P49916 1009 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 STIM1Q13586 685 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 GRAPQ13588 217 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 WTAPQ15007 396 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 GRAPLQ8TC17 118 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 WASF1Q92558 559 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 CCDC51Q96ER9 411 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 RBM17Q96I25 401 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 PPP1R1BQ9UD71 204 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 DUSP10Q9Y6W6 482 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 ITIH6Q6UXX5 1313 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 BRCA1P38398 1863 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 SLX4Q8IY92 1834 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 KCNJ18B7U540 433 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 H0YIN7 160 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 PES1O00541 588 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 DEXIO95424 95 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 CCDC172P0C7W6 258 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 NPR1P16066 1061 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 IGHMBP2P38935 993 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 UBXN1Q04323 297 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 C2orf54Q08AI8 447 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 KCNJ12Q14500 433 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 FKBP15Q5T1M5 1219 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 GPIHBP1Q8IV16 184 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 ACBD3Q9H3P7 528 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
SCLT1-201ENST00000281142 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
SCLT1-201ENST00000281142 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 AKNAD1Q5T1N1 836 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 MCTP2Q6DN12 878 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 SELENOOQ9BVL4 669 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 CXorf56Q9H5V9 222 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 CNNM1Q9NRU3 951 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 CPP00450 1065 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 KCNA3P22001 575 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 PPARAQ07869 468 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 DNAJC21Q5F1R6 531 aaKnown RBP12.72□□□□□ -0.37
SCLT1-201ENST00000281142 TCP11X2Q5H9J9 407 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 CCDC122Q5T0U0 273 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 TADA2BQ86TJ2 420 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 NELFBQ8WX92 580 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 ZNF622Q969S3 477 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■□□□□ 9.1
SCLT1-201ENST00000281142 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
SCLT1-201ENST00000281142 GSDMAQ96QA5 445 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 SAR1BQ9Y6B6 198 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 CHD4Q14839 1912 aa12.72□□□□□ -0.37
SCLT1-201ENST00000281142 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms