RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 TEPSINQ96N21 525 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-201ENST00000266589 BMP3P12645 472 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 CCDC173Q0VFZ6 552 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCAF11-201ENST00000266589 UVSSAQ2YD98 709 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
SCAF11-201ENST00000266589 BIN2Q9UBW5 565 aaPredicted RBP13.19□□□□□ -0.3
SCAF11-201ENST00000266589 H7C1D1 291 aa13.18□□□□□ -0.3
SCAF11-201ENST00000266589 IKQ13123 557 aaPredicted RBP13.18□□□□□ -0.3
SCAF11-201ENST00000266589 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
SCAF11-201ENST00000266589 STX1AQ16623 288 aa13.18□□□□□ -0.3
SCAF11-201ENST00000266589 QRICH1Q2TAL8 776 aa13.18□□□□□ -0.3
SCAF11-201ENST00000266589 JAKMIP3Q5VZ66 844 aa13.18□□□□□ -0.3
SCAF11-201ENST00000266589 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
SCAF11-201ENST00000266589 GOPCQ9HD26 462 aa13.18□□□□□ -0.3
SCAF11-201ENST00000266589 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
SCAF11-201ENST00000266589 VWA3AA6NCI4 1184 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 TMEM232C9JQI7 657 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 GPC2Q8N158 579 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 DNAJC25Q9H1X3 360 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 TMEM260Q9NX78 707 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
SCAF11-201ENST00000266589 ASNSP08243 561 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 LONRF3Q496Y0 759 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 USP49Q70CQ1 688 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 CNNM3Q8NE01 707 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 RIC8AQ9NPQ8 531 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
SCAF11-201ENST00000266589 A0A087WWV3 80 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 LETM2Q2VYF4 491 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 KIAA1755Q5JYT7 1200 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 ARL6IP4Q66PJ3 421 aaKnown RBP13.16□□□□□ -0.3
SCAF11-201ENST00000266589 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 PDILTQ8N807 584 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 C4orf32Q8N8J7 132 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 SYMPKQ92797 1274 aaKnown RBP13.16□□□□□ -0.3
SCAF11-201ENST00000266589 CUL5Q93034 780 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 EPSTI1Q96J88 318 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 PPP1R9BQ96SB3 815 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 ZNF165P49910 485 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 SNAP25P60880 206 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
SCAF11-201ENST00000266589 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
SCAF11-201ENST00000266589 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 CCDC84Q86UT8 332 aaPredicted RBP13.16□□□□□ -0.3
SCAF11-201ENST00000266589 TRPM4Q8TD43 1214 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 SYT17Q9BSW7 474 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 VCPKMTQ9H867 229 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 CBX8Q9HC52 389 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 ANO10Q9NW15 660 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
SCAF11-201ENST00000266589 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
SCAF11-201ENST00000266589 CAVIN2O95810 425 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 STAT2P52630 851 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
SCAF11-201ENST00000266589 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
SCAF11-201ENST00000266589 IL17AQ16552 155 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 UBE2SQ16763 222 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 FAM83BQ5T0W9 1011 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 C11orf57Q6ZUT1 292 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-201ENST00000266589 LUZP1Q86V48 1076 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 GLIS2Q9BZE0 524 aaPredicted RBP13.15□□□□□ -0.3
SCAF11-201ENST00000266589 PSTPIP2Q9H939 334 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 USP25Q9UHP3 1055 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 SERTAD1Q9UHV2 236 aa13.15□□□□□ -0.3
SCAF11-201ENST00000266589 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
SCAF11-201ENST00000266589 PNOCQ13519 176 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
SCAF11-201ENST00000266589 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
SCAF11-201ENST00000266589 AMNQ9BXJ7 453 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 HOOK1Q9UJC3 728 aaKnown RBP13.14□□□□□ -0.31
SCAF11-201ENST00000266589 PRR12Q9ULL5 1215 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 A0A087X0B3 334 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 LAD1O00515 517 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 ACTN4O43707 911 aaKnown RBP13.14□□□□□ -0.31
SCAF11-201ENST00000266589 EPS15P42566 896 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 ELOA2Q8IYF1 753 aaPredicted RBP13.14□□□□□ -0.31
SCAF11-201ENST00000266589 DHX58Q96C10 678 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 PDLIM2Q96JY6 352 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 FEZ1Q99689 392 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
SCAF11-201ENST00000266589 BIN1O00499 593 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 FOXN1O15353 648 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 NEMFO60524 1076 aa13.13□□□□□ -0.31
SCAF11-201ENST00000266589 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
SCAF11-201ENST00000266589 LONP1P36776 959 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms