RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PCDHA4Q9UN74 947 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 PPP1R7Q15435 360 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 CDAN1Q8IWY9 1227 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 COA7Q96BR5 231 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 CSRNP2Q9H175 543 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 NLRC4Q9NPP4 1024 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 GNA14O95837 355 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 ZNF354CQ86Y25 554 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 CERKQ8TCT0 537 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.32
TIMP3-201ENST00000266085 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.32
TIMP3-201ENST00000266085 MYO3AQ8NEV4 1616 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 BCRP11274 1271 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.32
TIMP3-201ENST00000266085 VPS72Q15906 364 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 NCAPG2Q86XI2 1143 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 CCDC26Q8TAB7 109 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 SH3RF3Q8TEJ3 882 aaPredicted RBP17.07■□□□□ 0.32
TIMP3-201ENST00000266085 STMN4Q9H169 189 aaPredicted RBP17.07■□□□□ 0.32
TIMP3-201ENST00000266085 PPP6R2O75170 966 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 CYP2D6P10635 497 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 RABL6Q3YEC7 729 aaPredicted RBP17.07■□□□□ 0.32
TIMP3-201ENST00000266085 SUPT20HL1Q3ZLR7 823 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 XKR9Q5GH70 373 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 FOXP4Q8IVH2 680 aaPredicted RBP17.07■□□□□ 0.32
TIMP3-201ENST00000266085 OR8K1Q8NGG5 319 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
TIMP3-201ENST00000266085 CPDO75976 1380 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 SORBS3O60504 671 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 UBXN2AP68543 259 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 CCDC51Q96ER9 411 aa17.07■□□□□ 0.32
TIMP3-201ENST00000266085 CCDC97Q96F63 343 aaPredicted RBP17.07■□□□□ 0.32
TIMP3-201ENST00000266085 XRCC5P13010 732 aaKnown RBP17.06■□□□□ 0.32
TIMP3-201ENST00000266085 DGKHQ86XP1 1220 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 EEF2KMTQ96G04 330 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 PGBD1Q96JS3 809 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 FANCLQ9NW38 375 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 KCNJ18B7U540 433 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 MMP1P03956 469 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 SCARF1Q14162 830 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 KCNJ12Q14500 433 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 RRAGAQ7L523 313 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 PODNQ7Z5L7 613 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 CARD6Q9BX69 1037 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 INCENPQ9NQS7 918 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 PIM2Q9P1W9 311 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 RCOR1Q9UKL0 485 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 ARFGAP2Q8N6H7 521 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 TBCKQ8TEA7 893 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
TIMP3-201ENST00000266085 TLDC2A0PJX2 215 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 ADKP55263 362 aaKnown RBP17.06■□□□□ 0.32
TIMP3-201ENST00000266085 SLC8A3P57103 927 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 MORC3Q14149 939 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 FAM26FQ5R3K3 315 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 SFMBT2Q5VUG0 894 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 CCDC25Q86WR0 208 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 TEKT3Q9BXF9 490 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
TIMP3-201ENST00000266085 ZBTB7AO95365 584 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 CYP2J2P51589 502 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 CFAP58Q5T655 872 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 LINC00301Q8NCQ3 95 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 ARMCX3Q9UH62 379 aaPredicted RBP17.05■□□□□ 0.32
TIMP3-201ENST00000266085 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 SPATA31A1Q5TZJ5 1347 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 LAD1O00515 517 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 MRFAP1L1Q96HT8 127 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 GSDMAQ96QA5 445 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 PRPF3O43395 683 aaKnown RBP17.05■□□□□ 0.32
TIMP3-201ENST00000266085 FAM102BQ5T8I3 360 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 LIN9Q5TKA1 542 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 SPATA1Q5VX52 437 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 C8orf74Q6P047 294 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 CTTNBP2NLQ9P2B4 639 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 KIAA1024Q9UPX6 916 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 HSPA1LP34931 641 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
TIMP3-201ENST00000266085 RRAGDQ9NQL2 400 aaPredicted RBP17.05■□□□□ 0.32
TIMP3-201ENST00000266085 RIOK3O14730 519 aaKnown RBP17.04■□□□□ 0.32
TIMP3-201ENST00000266085 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
TIMP3-201ENST00000266085 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 FAM84BQ96KN1 310 aaPredicted RBP17.04■□□□□ 0.32
TIMP3-201ENST00000266085 COL4A3BPQ9Y5P4 624 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 CDC25AP30304 524 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 PANK4Q9NVE7 773 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 TNNI1P19237 187 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 STAG1Q8WVM7 1258 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 TTC14Q96N46 770 aa17.04■□□□□ 0.32
TIMP3-201ENST00000266085 IFIH1Q9BYX4 1025 aaKnown RBP17.04■□□□□ 0.32
TIMP3-201ENST00000266085 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
TIMP3-201ENST00000266085 CRKP46108 304 aa17.03■□□□□ 0.32
TIMP3-201ENST00000266085 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms