RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 TEKT4Q8WW24 435 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 HIC2Q96JB3 615 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 PHACTR3Q96KR7 559 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 PA2G4Q9UQ80 394 aaKnown RBP6.24□□□□□ -1.41
VCAN-201ENST00000265077 SNX14Q9Y5W7 946 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 LMNAP02545 664 aaKnown RBP6.24□□□□□ -1.41
VCAN-201ENST00000265077 PHBP35232 272 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 LIN9Q5TKA1 542 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 PEX26Q7Z412 305 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 TRAIPQ9BWF2 469 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 A0A1W2PQ27 194 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 A0A1W2PQ64 194 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 A0A1W2PQD8 194 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 STX10O60499 249 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 OR8K1Q8NGG5 319 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 ZKSCAN3Q9BRR0 538 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 MEFVO15553 781 aaPredicted RBP6.24□□□□□ -1.41
VCAN-201ENST00000265077 SBNO1A3KN83 1393 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 MAP3K7CLP57077 242 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 ABCB6Q9NP58 842 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 DKK3Q9UBP4 350 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 CMA1P23946 247 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 TFCP2Q12800 502 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 KBTBD3Q8NAB2 608 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 NLRP3Q96P20 1036 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 NR1I2O75469 434 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 S100BP04271 92 aaPredicted RBP6.24□□□□□ -1.41
VCAN-201ENST00000265077 BLVRAP53004 296 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 NANOGNBQ7Z5D8 188 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 SIRT1Q96EB6 747 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 QRICH2Q9H0J4 1663 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 TRIM37O94972 964 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 YY1P25490 414 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 MAIP1Q8WWC4 291 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 IWS1Q96ST2 819 aa6.24□□□□□ -1.41
VCAN-201ENST00000265077 TMEM232C9JQI7 657 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KRT75O95678 551 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 BCRP11274 1271 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KDM4CQ9H3R0 1056 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 TMEM165Q9HC07 324 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 ZNF148Q9UQR1 794 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 SPATA31E1Q6ZUB1 1445 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 PRRC2BQ5JSZ5 2229 aaKnown RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 NBPF14Q5TI25 921 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 FBXO31Q5XUX0 539 aaPredicted RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 CARD14Q9BXL6 1004 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 YTHDC2Q9H6S0 1430 aaKnown RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 WDR7Q9Y4E6 1490 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 TADA3O75528 432 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 PDE4DQ08499 809 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KRT28Q7Z3Y7 464 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KLHL29Q96CT2 875 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 PCP11498 1178 aaKnown RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 MTHFSDQ2M296 383 aaKnown RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 GALNT17Q6IS24 598 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 SIKE1Q9BRV8 207 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 CCDC169A6NNP5 214 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 H7C1D1 291 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 CPA1P15085 419 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 TCP1P17987 556 aaKnown RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 NR1D1P20393 614 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 STAMBPL1Q96FJ0 436 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.23□□□□□ -1.41
VCAN-201ENST00000265077 MAN1A2O60476 641 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 ZWINTO95229 277 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 NNTQ13423 1086 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 CYLC2Q14093 348 aaPredicted RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 HAUS4Q9H6D7 363 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 DIAPH2O60879 1101 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 ZNF174Q15697 407 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 PRR16Q569H4 304 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 ATP2A3Q93084 1043 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 DCAF5Q96JK2 942 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 HSPA1LP34931 641 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KBTBD12Q3ZCT8 623 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 CLEC17AQ6ZS10 378 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 REXO1Q8N1G1 1221 aaKnown RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 CCT6BQ92526 530 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 PARVBQ9HBI1 364 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KDM3AQ9Y4C1 1321 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 GPAA1O43292 621 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 AHCYL1O43865 530 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KLC1Q07866 573 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 C16orf87Q6PH81 154 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 METTL22Q9BUU2 404 aaPredicted RBP6.23□□□□□ -1.41
VCAN-201ENST00000265077 ANGPTL2Q9UKU9 493 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KIF20BQ96Q89 1820 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 PHEXP78562 749 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 KCTD16Q68DU8 428 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 DYDC2Q96IM9 177 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 SETDB2Q96T68 719 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 SH2D4AQ9H788 454 aa6.23□□□□□ -1.41
VCAN-201ENST00000265077 ARHGAP10A1A4S6 786 aa6.22□□□□□ -1.41
VCAN-201ENST00000265077 HOXA7P31268 230 aaPredicted RBP6.22□□□□□ -1.41
VCAN-201ENST00000265077 IL13P35225 146 aa6.22□□□□□ -1.41
VCAN-201ENST00000265077 TBC1D1Q86TI0 1168 aaPredicted RBP6.22□□□□□ -1.41
VCAN-201ENST00000265077 RUNDC3BQ96NL0 473 aa6.22□□□□□ -1.41
VCAN-201ENST00000265077 SPZ1Q9BXG8 430 aa6.22□□□□□ -1.41
VCAN-201ENST00000265077 MAGEA1P43355 309 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms