RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 GUCY2DQ02846 1103 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 ITKQ08881 620 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 METTL13Q8N6R0 699 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 ZSCAN10Q96SZ4 725 aaPredicted RBP19.72■□□□□ 0.75
COL5A3-201ENST00000264828 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 CHL1O00533 1208 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 PDE6CP51160 858 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 PRPF31Q8WWY3 499 aaKnown RBP19.72■□□□□ 0.75
COL5A3-201ENST00000264828 IQCDQ96DY2 449 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 VCX3AQ9NNX9 186 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 USH1CQ9Y6N9 552 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 NPC1L1Q9UHC9 1359 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 ENC1O14682 589 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 ANKRD13CQ8N6S4 541 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 PPP1R13BQ96KQ4 1090 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 GOLGA8HP0CJ92 632 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 IVNS1ABPQ9Y6Y0 642 aa19.72■□□□□ 0.75
COL5A3-201ENST00000264828 RPN1P04843 607 aaKnown RBP19.71■□□□□ 0.75
COL5A3-201ENST00000264828 PPP2R5AQ15172 486 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 EEF2KMTQ96G04 330 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 TESPA1A2RU30 521 aaPredicted RBP19.71■□□□□ 0.75
COL5A3-201ENST00000264828 P4HA1P13674 534 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 SNCBQ16143 134 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 BRDTQ58F21 947 aaPredicted RBP19.71■□□□□ 0.75
COL5A3-201ENST00000264828 MAP3K21Q5TCX8 1036 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 CACYBPQ9HB71 228 aaKnown RBP19.71■□□□□ 0.75
COL5A3-201ENST00000264828 RASSF7Q02833 373 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 ADCY1Q08828 1119 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 PCDHA7Q9UN72 937 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 ZMYM6O95789 1325 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 IFRD2Q12894 506 aaPredicted RBP19.71■□□□□ 0.75
COL5A3-201ENST00000264828 NRBP1Q9UHY1 535 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 PTPRTO14522 1441 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 DBN1Q16643 649 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 WHAMMQ8TF30 809 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 SDR42E1Q8WUS8 393 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 MMS19Q96T76 1030 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 TSPYL2Q9H2G4 693 aaPredicted RBP19.71■□□□□ 0.75
COL5A3-201ENST00000264828 MTMR6Q9Y217 621 aa19.71■□□□□ 0.75
COL5A3-201ENST00000264828 GSTA1P08263 222 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 GSTA2P09210 222 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 DLATP10515 647 aaKnown RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 TSPOAP1O95153 1857 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 RPSAP08865 295 aaKnown RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 ADD1P35611 737 aaKnown RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 KAT6BQ8WYB5 2073 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 SPECC1L-ADORA2AF8WAN1 911 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 H0YIN7 160 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 ZNF500O60304 480 aaPredicted RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 ZMYND10O75800 440 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 IFNAR2P48551 515 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 LIG4P49917 911 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 OTUD6AQ7L8S5 288 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 DCLK2Q8N568 766 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 SYMPKQ92797 1274 aaKnown RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 SLAIN2Q9P270 581 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 SPDYE16A6NNV3 312 aaPredicted RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 YWHAEP62258 255 aaKnown RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 IRX4P78413 519 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 SPDYE2Q495Y8 402 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 NLRX1Q86UT6 975 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 POC1B-GALNT4F8VUJ3 575 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 ATP5JP18859 108 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 EHHADHQ08426 723 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 JADE1Q6IE81 842 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 DNAJC10Q8IXB1 793 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 GLG1Q92896 1179 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 HVCN1Q96D96 273 aa19.7■□□□□ 0.74
COL5A3-201ENST00000264828 ZNF274Q96GC6 653 aaPredicted RBP19.7■□□□□ 0.74
COL5A3-201ENST00000264828 SYNJ2BP-COX16A0A087WUM0 186 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 HADHQ16836 314 aaKnown RBP19.69■□□□□ 0.74
COL5A3-201ENST00000264828 CCDC93Q567U6 631 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 PDZD8Q8NEN9 1154 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 COX16Q9P0S2 106 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 ARMCX3Q9UH62 379 aaPredicted RBP19.69■□□□□ 0.74
COL5A3-201ENST00000264828 TRPC6Q9Y210 931 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 MLH3Q9UHC1 1453 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 BLMP54132 1417 aaPredicted RBP19.69■□□□□ 0.74
COL5A3-201ENST00000264828 LRRC8CQ8TDW0 803 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 MX2P20592 715 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 EIF4A1P60842 406 aaKnown RBP19.69■□□□□ 0.74
COL5A3-201ENST00000264828 IL1RL1Q01638 556 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 LRRC47Q8N1G4 583 aaKnown RBP19.69■□□□□ 0.74
COL5A3-201ENST00000264828 GOLGA5Q8TBA6 731 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 ARPP21Q9UBL0 812 aaPredicted RBP19.69■□□□□ 0.74
COL5A3-201ENST00000264828 USP17L12C9JPN9 530 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 USP17L21D6R901 530 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 MAD1L1Q9Y6D9 718 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 ABL1P00519 1130 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 KRT3P12035 628 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 TTBK2Q6IQ55 1244 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 SPDL1Q96EA4 605 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 C1orf112Q9NSG2 853 aa19.69■□□□□ 0.74
COL5A3-201ENST00000264828 DDX25Q9UHL0 483 aaKnown RBP19.69■□□□□ 0.74
COL5A3-201ENST00000264828 KDM5DQ9BY66 1539 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 ARHGEF16Q5VV41 709 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 PPM1KQ8N3J5 372 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 TM6SF1Q9BZW5 370 aa19.68■□□□□ 0.74
COL5A3-201ENST00000264828 ETF1P62495 437 aaKnown RBP19.68■□□□□ 0.74
COL5A3-201ENST00000264828 PSTPIP2Q9H939 334 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms