RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SMCR8Q8TEV9 937 aaPredicted RBP15.47■□□□□ 0.07
CDH3-201ENST00000264012 TNS3Q68CZ2 1445 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 ATP2A2P16615 1042 aaKnown RBP15.47■□□□□ 0.07
CDH3-201ENST00000264012 RPS6KA1Q15418 735 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 DPCR1Q3MIW9 517 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 AIFM3Q96NN9 605 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 COL4A3BPQ9Y5P4 624 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 LMTK2Q8IWU2 1503 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 CC2D2BQ6DHV5 1058 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 FAM178BQ8IXR5 827 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 PAGR1Q9BTK6 254 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 KANSL2Q9H9L4 492 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 MAGEF1Q9HAY2 307 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 SLC8A3P57103 927 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 KCTD1Q719H9 257 aa15.47■□□□□ 0.07
CDH3-201ENST00000264012 CD19P15391 556 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 TNNI1P19237 187 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 STAT1P42224 750 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 FAM102BQ5T8I3 360 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 PEX26Q7Z412 305 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 IFT20Q8IY31 132 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 TTC16Q8NEE8 873 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 EEF2KMTQ96G04 330 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 TEKT3Q9BXF9 490 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 TRIM6Q9C030 488 aaPredicted RBP15.46■□□□□ 0.07
CDH3-201ENST00000264012 LARSQ9P2J5 1176 aaKnown RBP15.46■□□□□ 0.07
CDH3-201ENST00000264012 TSKSQ9UJT2 592 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 CCPG1Q9ULG6 757 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 PIGSQ96S52 555 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 NOD1Q9Y239 953 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 PRPF3O43395 683 aaKnown RBP15.46■□□□□ 0.07
CDH3-201ENST00000264012 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
CDH3-201ENST00000264012 ERCC5P28715 1186 aaPredicted RBP15.46■□□□□ 0.07
CDH3-201ENST00000264012 XKR9Q5GH70 373 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 ZNF365Q70YC5 407 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 DEPTORQ8TB45 409 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 PSMD1Q99460 953 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 TRIM31Q9BZY9 425 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 CUEDC2Q9H467 287 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 KIAA1024Q9UPX6 916 aa15.46■□□□□ 0.07
CDH3-201ENST00000264012 EBAG9O00559 213 aa15.46■□□□□ 0.06
CDH3-201ENST00000264012 CFAP221Q4G0U5 840 aa15.46■□□□□ 0.06
CDH3-201ENST00000264012 KRT26Q7Z3Y9 468 aa15.46■□□□□ 0.06
CDH3-201ENST00000264012 CPLX4Q7Z7G2 160 aa15.46■□□□□ 0.06
CDH3-201ENST00000264012 SYCE1Q8N0S2 351 aa15.46■□□□□ 0.06
CDH3-201ENST00000264012 KCNK9Q9NPC2 374 aa15.46■□□□□ 0.06
CDH3-201ENST00000264012 PPP2R2CQ9Y2T4 447 aa15.46■□□□□ 0.06
CDH3-201ENST00000264012 SLC16A2P36021 539 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 KLHL7Q8IXQ5 586 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 ANKS4BQ8N8V4 417 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 PNMA2Q9UL42 364 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 UTP11Q9Y3A2 253 aaKnown RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 CYP19A1P11511 503 aaPredicted RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 DCUN1D2Q6PH85 259 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 USP17L2Q6R6M4 530 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 OTUD6BQ8N6M0 293 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 CCDC63Q8NA47 563 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 AK8Q96MA6 479 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 TXNDC16Q9P2K2 825 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 SETD1BQ9UPS6 1966 aaKnown RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 ADAM9Q13443 819 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 GPR161Q8N6U8 529 aaKnown RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 GOLGA5Q8TBA6 731 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 TBCKQ8TEA7 893 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 CDHR2Q9BYE9 1310 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 CEP152O94986 1710 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 RPAP1Q9BWH6 1393 aaPredicted RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 GDF11O95390 407 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 KRT19P08727 400 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 LARP4BQ92615 738 aaKnown RBP15.45■□□□□ 0.06
CDH3-201ENST00000264012 ISCA1Q9BUE6 129 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 SAR1BQ9Y6B6 198 aa15.45■□□□□ 0.06
CDH3-201ENST00000264012 A0A087WWV3 80 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 K7ENM7 598 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 IGSF3O75054 1194 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 SLFN14P0C7P3 912 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 ETF1P62495 437 aaKnown RBP15.44■□□□□ 0.06
CDH3-201ENST00000264012 TOB2Q14106 344 aaPredicted RBP15.44■□□□□ 0.06
CDH3-201ENST00000264012 C6orf163Q5TEZ5 329 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 ZNF772Q68DY9 489 aaPredicted RBP15.44■□□□□ 0.06
CDH3-201ENST00000264012 MLXIPQ9HAP2 919 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 NARFQ9UHQ1 456 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 LAMC1P11047 1609 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 COPB1P53618 953 aaKnown RBP15.44■□□□□ 0.06
CDH3-201ENST00000264012 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 DAAM2Q86T65 1068 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 U2AF1L4Q8WU68 220 aaKnown RBP15.44■□□□□ 0.06
CDH3-201ENST00000264012 GPR101Q96P66 508 aaPredicted RBP15.44■□□□□ 0.06
CDH3-201ENST00000264012 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 DHX36Q9H2U1 1008 aaKnown RBP15.44■□□□□ 0.06
CDH3-201ENST00000264012 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 GBP6Q6ZN66 633 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 FBF1Q8TES7 1133 aa15.44■□□□□ 0.06
CDH3-201ENST00000264012 FERP16591 822 aa15.43■□□□□ 0.06
CDH3-201ENST00000264012 EAPPQ56P03 285 aaPredicted RBP15.43■□□□□ 0.06
CDH3-201ENST00000264012 ANKRD35Q8N283 1001 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms