RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 USP17L19D6RCP7 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L20D6RJB6 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 GTF2A2P52657 109 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 USP17L24Q0WX57 530 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 AGTPBP1Q9UPW5 1226 aa31.72■■■□□ 2.67
SMARCD3-201ENST00000262188 VPS37CA5D8V6 355 aaPredicted RBP31.71■■■□□ 2.67
SMARCD3-201ENST00000262188 ZBTB5O15062 677 aa31.71■■■□□ 2.67
SMARCD3-201ENST00000262188 SLC10A3P09131 477 aa31.71■■■□□ 2.67
SMARCD3-201ENST00000262188 APLP1P51693 650 aa31.71■■■□□ 2.67
SMARCD3-201ENST00000262188 PRPF38AQ8NAV1 312 aaKnown RBP31.71■■■□□ 2.67
SMARCD3-201ENST00000262188 C8orf76Q96K31 380 aa31.71■■■□□ 2.67
SMARCD3-201ENST00000262188 PTPN18Q99952 460 aa31.7■■■□□ 2.67
SMARCD3-201ENST00000262188 ADAMTS3O15072 1205 aa31.7■■■□□ 2.66
SMARCD3-201ENST00000262188 PLA2G6O60733 806 aa31.7■■■□□ 2.66
SMARCD3-201ENST00000262188 CETPP11597 493 aa31.7■■■□□ 2.66
SMARCD3-201ENST00000262188 POTEEQ6S8J3 1075 aa31.7■■■□□ 2.66
SMARCD3-201ENST00000262188 FASTKD5Q7L8L6 764 aaKnown RBP31.7■■■□□ 2.66
SMARCD3-201ENST00000262188 ZDHHC9Q9Y397 364 aa31.7■■■□□ 2.66
SMARCD3-201ENST00000262188 SMCHD1A6NHR9 2005 aa31.7■■■□□ 2.66
SMARCD3-201ENST00000262188 PNMA6FA0A0J9YX94 578 aa31.69■■■□□ 2.66
SMARCD3-201ENST00000262188 BTBD19C9JJ37 291 aa31.69■■■□□ 2.66
SMARCD3-201ENST00000262188 USH1GQ495M9 461 aa31.69■■■□□ 2.66
SMARCD3-201ENST00000262188 STX6O43752 255 aa31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 COG2Q14746 738 aa31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 P2RX7Q99572 595 aaKnown RBP31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 ASCC2Q9H1I8 757 aaPredicted RBP31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 RANBP17Q9H2T7 1088 aaKnown RBP31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 SPDYE16A6NNV3 312 aaPredicted RBP31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 STXBP3O00186 592 aa31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 DSG3P32926 999 aa31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 KRT40Q6A162 431 aa31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 MTMR6Q9Y217 621 aa31.68■■■□□ 2.66
SMARCD3-201ENST00000262188 CPXCR1Q8N123 301 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 WASF1Q92558 559 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 H3BQV1 296 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 CYP2C8P10632 490 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 HOXA7P31268 230 aaPredicted RBP31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 IFFO2Q5TF58 517 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 AGBL1Q96MI9 1066 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 MAP7D2Q96T17 732 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 RAVER2Q9HCJ3 691 aaKnown RBP31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 CREBZFQ9NS37 354 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 KIF3AQ9Y496 699 aa31.67■■■□□ 2.66
SMARCD3-201ENST00000262188 VWA5AO00534 786 aa31.66■■■□□ 2.66
SMARCD3-201ENST00000262188 IRX3P78415 501 aaPredicted RBP31.66■■■□□ 2.66
SMARCD3-201ENST00000262188 FERMT3Q86UX7 667 aa31.66■■■□□ 2.66
SMARCD3-201ENST00000262188 FBXO18Q8NFZ0 1043 aa31.66■■■□□ 2.66
SMARCD3-201ENST00000262188 BARHL2Q9NY43 387 aa31.66■■■□□ 2.66
SMARCD3-201ENST00000262188 RBM27Q9P2N5 1060 aaKnown RBP31.66■■■□□ 2.66
SMARCD3-201ENST00000262188 ZNF536O15090 1300 aa31.66■■■□□ 2.66
SMARCD3-201ENST00000262188 A0A0U1RQG5 324 aaPredicted RBP31.65■■■□□ 2.66
SMARCD3-201ENST00000262188 SLC38A10Q9HBR0 1119 aa31.65■■■□□ 2.66
SMARCD3-201ENST00000262188 COL11A1P12107 1806 aaPredicted RBP31.65■■■□□ 2.66
SMARCD3-201ENST00000262188 PDHXO00330 501 aa31.65■■■□□ 2.66
SMARCD3-201ENST00000262188 PDCP20941 246 aa31.64■■■□□ 2.66
SMARCD3-201ENST00000262188 NAPAP54920 295 aa31.64■■■□□ 2.66
SMARCD3-201ENST00000262188 FBXO11Q86XK2 927 aa31.64■■■□□ 2.66
SMARCD3-201ENST00000262188 PCDHA1Q9Y5I3 950 aa31.64■■■□□ 2.66
SMARCD3-201ENST00000262188 IGF2BP3O00425 579 aaKnown RBP eCLIP31.63■■■□□ 2.65
SMARCD3-201ENST00000262188 AOC2O75106 756 aa31.63■■■□□ 2.65
SMARCD3-201ENST00000262188 OXER1Q8TDS5 423 aa31.63■■■□□ 2.65
SMARCD3-201ENST00000262188 CCDC102AQ96A19 550 aa31.63■■■□□ 2.65
SMARCD3-201ENST00000262188 TRIM29Q14134 588 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 DEFB115Q30KQ5 88 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 MCTP1Q6DN14 999 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 REPS2Q8NFH8 660 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 CHAMP1Q96JM3 812 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 AMNQ9BXJ7 453 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 CHMP5Q9NZZ3 219 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 ADAMTS5Q9UNA0 930 aa31.62■■■□□ 2.65
SMARCD3-201ENST00000262188 HERVK_113P62684 666 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 TMEM132BQ14DG7 1078 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 NPY5RQ15761 445 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 FOXD4L6Q3SYB3 417 aaPredicted RBP31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 FOXD4L3Q6VB84 417 aaPredicted RBP31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 HHIPL1Q96JK4 782 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 PHF20Q9BVI0 1012 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 HOXC10Q9NYD6 342 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 KIF28PB7ZC32 967 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 ZBED4O75132 1171 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 PCNTO95613 3336 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 NLRP5P59047 1200 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 PAGR1Q9BTK6 254 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 BTBD7Q9P203 1132 aa31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 CTDP1Q9Y5B0 961 aaPredicted RBP31.61■■■□□ 2.65
SMARCD3-201ENST00000262188 RASSF10A6NK89 507 aa31.6■■■□□ 2.65
SMARCD3-201ENST00000262188 BRD1O95696 1058 aa31.6■■■□□ 2.65
SMARCD3-201ENST00000262188 HOMER2Q9NSB8 354 aa31.6■■■□□ 2.65
SMARCD3-201ENST00000262188 CCPG1Q9ULG6 757 aa31.6■■■□□ 2.65
SMARCD3-201ENST00000262188 MANSC4A6NHS7 340 aaPredicted RBP31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 MMP1P03956 469 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 ZSCAN22P10073 491 aaPredicted RBP31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 PLS1Q14651 629 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 ANKRD23Q86SG2 305 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 CAPNS2Q96L46 248 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 RIPK3Q9Y572 518 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 TESPA1A2RU30 521 aaPredicted RBP31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 OSBPP22059 807 aa31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 KIF23Q02241 960 aaPredicted RBP31.59■■■□□ 2.65
SMARCD3-201ENST00000262188 NR5A1Q13285 461 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms