RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 NOSTRINQ8IVI9 506 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ABI1Q8IZP0 508 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 ADPGKQ9BRR6 497 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 VPS37BQ9H9H4 285 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 STAM2O75886 525 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 SUSD4Q5VX71 490 aa13.41□□□□□ -0.26
SPG11-201ENST00000261866 A0A087WWV3 80 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 RPS6KC1Q96S38 1066 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 DBNLQ9UJU6 430 aaKnown RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 LRFN2Q9ULH4 789 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 KCNA4P22459 653 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 RNASELQ05823 741 aaKnown RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 PEX26Q7Z412 305 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 TTC30AQ86WT1 665 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 SKA2Q8WVK7 121 aaPredicted RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 DESI2Q9BSY9 194 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 OR52Z1P0C646 297 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 TMEM191BP0C7N4 346 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 XRCC5P13010 732 aaKnown RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 SYNE4Q8N205 404 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 CARD6Q9BX69 1037 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 STIM2Q9P246 746 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 KCNJ18B7U540 433 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 KCNJ12Q14500 433 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 LRCH2Q5VUJ6 765 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 MYOCDQ8IZQ8 938 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 AP5M1Q9H0R1 490 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 FNDC3AQ9Y2H6 1198 aaKnown RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 AOX1Q06278 1338 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 ZBTB24O43167 697 aaPredicted RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 MORC3Q14149 939 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 HLFQ16534 295 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 ARMC9Q7Z3E5 817 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 ZNF653Q96CK0 615 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 PRKAG2Q9UGJ0 569 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 KDM5AP29375 1690 aaKnown RBP13.4□□□□□ -0.26
SPG11-201ENST00000261866 KDM2BQ8NHM5 1336 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 ADCY9O60503 1353 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 GOLGA8FQ08AF8 430 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 GOLGA8DPQ0D2H9 430 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 SCRN1Q12765 414 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 USP28Q96RU2 1077 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 CSRNP2Q9H175 543 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 NKIRAS1Q9NYS0 192 aa13.4□□□□□ -0.26
SPG11-201ENST00000261866 GOLGA6CA6NDK9 693 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 GOLGA6BA6NDN3 693 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 INO80B-WBP1J3KQ70 363 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 GOLGA6DP0CG33 693 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 SMYD4Q8IYR2 804 aaPredicted RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 UHMK1Q8TAS1 419 aaKnown RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 TTC14Q96N46 770 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 INO80BQ9C086 356 aaPredicted RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 NT5C3AQ9H0P0 336 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 GOLGA6AQ9NYA3 693 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 SASH1O94885 1247 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 CDC25AP30304 524 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 ATL3Q6DD88 541 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 PTGDRQ13258 359 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 AOC3Q16853 763 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 CCDC170Q8IYT3 715 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 VPS52Q8N1B4 723 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 RYBPQ8N488 228 aaPredicted RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 MED23Q9ULK4 1368 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 PKP1Q13835 747 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 CLIC2O15247 247 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 ZNF75DP51815 510 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 DCLK2Q8N568 766 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 ABCF3Q9NUQ8 709 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 NUB1Q9Y5A7 615 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 BZW2Q9Y6E2 419 aaKnown RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 AFF2P51816 1311 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 GMNNO75496 209 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 FMNL1O95466 1100 aaPredicted RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
SPG11-201ENST00000261866 MYSM1Q5VVJ2 828 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 RSAD2Q8WXG1 361 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 SAMD15Q9P1V8 674 aa13.39□□□□□ -0.27
SPG11-201ENST00000261866 MYL3P08590 195 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 TMOD1P28289 359 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 PDE1CQ14123 709 aaPredicted RBP13.38□□□□□ -0.27
SPG11-201ENST00000261866 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 GUCY2FP51841 1108 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 ARHGEF25Q86VW2 580 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 DYNC1I1O14576 645 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 MTERF2Q49AM1 385 aa13.38□□□□□ -0.27
SPG11-201ENST00000261866 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms