RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CAPN9O14815 690 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 PDE6CP51160 858 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 YWHAEP62258 255 aaKnown RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 GOLGA8DPQ0D2H9 430 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 EEF2KMTQ96G04 330 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 PGBD1Q96JS3 809 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 PUS3Q9BZE2 481 aaKnown RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 SAR1BQ9Y6B6 198 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 KDM5AP29375 1690 aaKnown RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 M0R2C6 588 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ICA1Q05084 483 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 NEK8Q86SG6 692 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 PLA2G4DQ86XP0 818 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 MYRIPQ8NFW9 859 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 CCDC127Q96BQ5 260 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 KIAA1468Q9P260 1216 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 RPN1P04843 607 aaKnown RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 SCG2P13521 617 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 PIK3CAP42336 1068 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ZBTB8OSQ8IWT0 167 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 ZBTB38Q8NAP3 1195 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 IL17REQ8NFR9 667 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 CABS1Q96KC9 395 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 TLR7Q9NYK1 1049 aaKnown RBP13.3□□□□□ -0.28
COL8A1-201ENST00000261037 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
COL8A1-201ENST00000261037 CLRN2A0PK11 232 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 CSPG5O95196 566 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 NDUFA8P51970 172 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 PKP1Q13835 747 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 USP44Q9H0E7 712 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 VCX3BQ9H321 246 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 PFKFB2O60825 505 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 BRD1O95696 1058 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 C4orf50Q6ZRC1 276 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 BEGAINQ9BUH8 593 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 NUF2Q9BZD4 464 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 RAB17Q9H0T7 212 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 SLAIN2Q9P270 581 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 KDM5DQ9BY66 1539 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 RGS16O15492 202 aaPredicted RBP13.29□□□□□ -0.28
COL8A1-201ENST00000261037 STX2P32856 288 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 SEPT6Q14141 434 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 SLFN12Q8IYM2 578 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 C1orf112Q9NSG2 853 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 MRPL11Q9Y3B7 192 aaKnown RBP13.29□□□□□ -0.28
COL8A1-201ENST00000261037 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 BTBD18B2RXH4 712 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 FGAP02671 866 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 OATP04181 439 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 SCYL1Q96KG9 808 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
COL8A1-201ENST00000261037 CASQ2O14958 399 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-201ENST00000261037 PHKA1P46020 1223 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 ARMCX5Q6P1M9 558 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 LMNTD2Q8IXW0 634 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 PPM1KQ8N3J5 372 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 CEP120Q8N960 986 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 CCPG1Q9ULG6 757 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 ATP2B4P23634 1241 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 POLGP54098 1239 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-201ENST00000261037 SCRN1Q12765 414 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 SH2D4BQ5SQS7 431 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 NAA35Q5VZE5 725 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 NME8Q8N427 588 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 MAIP1Q8WWC4 291 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 CD2APQ9Y5K6 639 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 PALM3A6NDB9 673 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-201ENST00000261037 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-201ENST00000261037 KCTD1Q719H9 257 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 RASGRP4Q8TDF6 673 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 NUCKS1Q9H1E3 243 aaKnown RBP13.28□□□□□ -0.28
COL8A1-201ENST00000261037 FANCLQ9NW38 375 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 PCDHA7Q9UN72 937 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 PPP2R2CQ9Y2T4 447 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 ABCC4O15439 1325 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 ATP1A2P50993 1020 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
COL8A1-201ENST00000261037 FAM178BQ8IXR5 827 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 HACE1Q8IYU2 909 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 MIPOL1Q8TD10 442 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 CLNS1AP54105 237 aaKnown RBP13.28□□□□□ -0.28
COL8A1-201ENST00000261037 GPR162Q16538 588 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 SLFN13Q68D06 897 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
COL8A1-201ENST00000261037 LTKP29376 864 aa13.27□□□□□ -0.28
COL8A1-201ENST00000261037 ADAM9Q13443 819 aa13.27□□□□□ -0.28
COL8A1-201ENST00000261037 TTC19Q6DKK2 380 aaPredicted RBP13.27□□□□□ -0.28
COL8A1-201ENST00000261037 PARP2Q9UGN5 583 aa13.27□□□□□ -0.28
COL8A1-201ENST00000261037 SEPT9Q9UHD8 586 aaPredicted RBP13.27□□□□□ -0.28
COL8A1-201ENST00000261037 PTPN22Q9Y2R2 807 aa13.27□□□□□ -0.28
COL8A1-201ENST00000261037 DYNLL1P63167 89 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms