RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 TRIM10Q9UDY6 481 aa16.46■□□□□ 0.23
CAB39-201ENST00000258418 ZBTB22O15209 634 aa16.46■□□□□ 0.23
CAB39-201ENST00000258418 ERCC5P28715 1186 aaPredicted RBP16.46■□□□□ 0.23
CAB39-201ENST00000258418 ADCY7P51828 1080 aa16.46■□□□□ 0.23
CAB39-201ENST00000258418 NEK8Q86SG6 692 aa16.46■□□□□ 0.23
CAB39-201ENST00000258418 TMTC1Q8IUR5 882 aa16.46■□□□□ 0.23
CAB39-201ENST00000258418 TRIML1Q8N9V2 468 aa16.46■□□□□ 0.23
CAB39-201ENST00000258418 OR8K1Q8NGG5 319 aa16.46■□□□□ 0.23
CAB39-201ENST00000258418 EPN1Q9Y6I3 576 aaPredicted RBP16.46■□□□□ 0.23
CAB39-201ENST00000258418 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 BUB1O43683 1085 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 PAFAH1B1P43034 410 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 CEP95Q96GE4 821 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 CHP1Q99653 195 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 A0A0U1RQJ8 604 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 DDX39AO00148 427 aaKnown RBP16.45■□□□□ 0.22
CAB39-201ENST00000258418 CT47A1Q5JQC4 288 aaPredicted RBP16.45■□□□□ 0.22
CAB39-201ENST00000258418 SMCR8Q8TEV9 937 aaPredicted RBP16.45■□□□□ 0.22
CAB39-201ENST00000258418 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
CAB39-201ENST00000258418 CACNA1FO60840 1977 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 STK36Q9NRP7 1315 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 SP4Q02446 784 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 FAM114A1Q8IWE2 563 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 CEP112Q8N8E3 955 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 RIOK1Q9BRS2 568 aaKnown RBP16.45■□□□□ 0.22
CAB39-201ENST00000258418 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
CAB39-201ENST00000258418 GDF11O95390 407 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 FCER1AP12319 257 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 KRT25Q7Z3Z0 450 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 IFT81Q8WYA0 676 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 PARD6BQ9BYG5 372 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 NALCNQ8IZF0 1738 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 MEIS1O00470 390 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 ACTN4O43707 911 aaKnown RBP16.44■□□□□ 0.22
CAB39-201ENST00000258418 PLCG2P16885 1265 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 PFKFB3Q16875 520 aaPredicted RBP16.44■□□□□ 0.22
CAB39-201ENST00000258418 CNOT6LQ96LI5 555 aaKnown RBP16.44■□□□□ 0.22
CAB39-201ENST00000258418 NARFQ9UHQ1 456 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 HPSEQ9Y251 543 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 GRIK5Q16478 980 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 RDH13Q8NBN7 331 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 TMOD2Q9NZR1 351 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 BCCIPQ9P287 314 aaKnown RBP eCLIP16.44■□□□□ 0.22
CAB39-201ENST00000258418 HDAC6Q9UBN7 1215 aa16.44■□□□□ 0.22
CAB39-201ENST00000258418 VGLL3A8MV65 326 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 CAPN2P17655 700 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
CAB39-201ENST00000258418 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 RAD9BQ6WBX8 426 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 TC2NQ8N9U0 490 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 TAF4BQ92750 862 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 PHF20Q9BVI0 1012 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 XDHP47989 1333 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 SPATA31A1Q5TZJ5 1347 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 RGPD1P0DJD0 1748 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 BICDL2A1A5D9 508 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 SF3A3Q12874 501 aaKnown RBP eCLIP16.43■□□□□ 0.22
CAB39-201ENST00000258418 NYAP1Q6ZVC0 841 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 CD209Q9NNX6 404 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 DISC1Q9NRI5 854 aa16.43■□□□□ 0.22
CAB39-201ENST00000258418 SPDYE3A6NKU9 549 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 CFBP00751 764 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 KRT83P78385 493 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 PKN1Q16512 942 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 PRR16Q569H4 304 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 MFAP3LO75121 409 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 IBSPP21815 317 aaPredicted RBP16.42■□□□□ 0.22
CAB39-201ENST00000258418 GPSM2P81274 684 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 BPIFA3Q9BQP9 254 aa16.42■□□□□ 0.22
CAB39-201ENST00000258418 USP17L15C9J2P7 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L13C9JLJ4 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L11C9JVI0 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L18D6R9N7 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L22D6RA61 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L17D6RBQ6 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L19D6RCP7 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L20D6RJB6 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 TACC1O75410 805 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 TDP2O95551 362 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 LONP1P36776 959 aaKnown RBP16.41■□□□□ 0.22
CAB39-201ENST00000258418 MRPL12P52815 198 aaKnown RBP16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L24Q0WX57 530 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 SEC23AQ15436 765 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 TTBK2Q6IQ55 1244 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
CAB39-201ENST00000258418 FGFR1OPO95684 399 aaKnown RBP16.41■□□□□ 0.22
CAB39-201ENST00000258418 PNMA6AP0CW24 399 aaPredicted RBP16.41■□□□□ 0.22
CAB39-201ENST00000258418 MAGEA1P43355 309 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 ZNF658Q5TYW1 1059 aaPredicted RBP16.41■□□□□ 0.22
CAB39-201ENST00000258418 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 FAM205AQ6ZU69 1335 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 TTC26A0AVF1 554 aa16.41■□□□□ 0.22
CAB39-201ENST00000258418 EFCAB8A8MWE9 144 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms