RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 CRY2Q49AN0 593 aa27.78■■■□□ 2.04
LMO2-201ENST00000257818 IFIT1BQ5T764 474 aaKnown RBP27.78■■■□□ 2.04
LMO2-201ENST00000257818 CATIPQ7Z7H3 387 aa27.78■■■□□ 2.04
LMO2-201ENST00000257818 TRIM10Q9UDY6 481 aa27.78■■■□□ 2.04
LMO2-201ENST00000257818 DUOX1Q9NRD9 1551 aa27.78■■■□□ 2.04
LMO2-201ENST00000257818 SPAG1Q07617 926 aa27.78■■■□□ 2.04
LMO2-201ENST00000257818 TRIM14Q14142 442 aa27.78■■■□□ 2.04
LMO2-201ENST00000257818 BRMS1Q9HCU9 246 aa27.78■■■□□ 2.04
LMO2-201ENST00000257818 GTPBP6O43824 516 aaPredicted RBP27.77■■■□□ 2.04
LMO2-201ENST00000257818 GPSM2P81274 684 aa27.76■■■□□ 2.04
LMO2-201ENST00000257818 RBM28Q9NW13 759 aaKnown RBP27.76■■■□□ 2.04
LMO2-201ENST00000257818 CWC15Q9P013 229 aaKnown RBP27.76■■■□□ 2.04
LMO2-201ENST00000257818 LRRIQ3A6PVS8 624 aaPredicted RBP27.76■■■□□ 2.03
LMO2-201ENST00000257818 ZNF658Q5TYW1 1059 aaPredicted RBP27.76■■■□□ 2.03
LMO2-201ENST00000257818 TMTC3Q6ZXV5 915 aa27.76■■■□□ 2.03
LMO2-201ENST00000257818 POLRMTO00411 1230 aaKnown RBP27.75■■■□□ 2.03
LMO2-201ENST00000257818 ADAMTS3O15072 1205 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 BRIP1Q9BX63 1249 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 GBP3Q9H0R5 595 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 MAPK8IP1Q9UQF2 711 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 GDAQ9Y2T3 454 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 EPN1Q9Y6I3 576 aaPredicted RBP27.75■■■□□ 2.03
LMO2-201ENST00000257818 CNTNAP5Q8WYK1 1306 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 NDUFA10O95299 355 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 WDR93Q6P2C0 686 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 IRF2BP1Q8IU81 584 aa27.75■■■□□ 2.03
LMO2-201ENST00000257818 UBXN1Q04323 297 aa27.74■■■□□ 2.03
LMO2-201ENST00000257818 RBM17Q96I25 401 aaKnown RBP27.74■■■□□ 2.03
LMO2-201ENST00000257818 GUCA1BQ9UMX6 200 aa27.74■■■□□ 2.03
LMO2-201ENST00000257818 CCDC88AQ3V6T2 1871 aa27.74■■■□□ 2.03
LMO2-201ENST00000257818 PIK3AP1Q6ZUJ8 805 aa27.74■■■□□ 2.03
LMO2-201ENST00000257818 TRAPPC11Q7Z392 1133 aa27.74■■■□□ 2.03
LMO2-201ENST00000257818 SRBD1Q8N5C6 995 aaKnown RBP27.74■■■□□ 2.03
LMO2-201ENST00000257818 MYO1CO00159 1063 aa27.73■■■□□ 2.03
LMO2-201ENST00000257818 RPN1P04843 607 aaKnown RBP27.73■■■□□ 2.03
LMO2-201ENST00000257818 PRCPP42785 496 aa27.73■■■□□ 2.03
LMO2-201ENST00000257818 CTR9Q6PD62 1173 aa27.73■■■□□ 2.03
LMO2-201ENST00000257818 ANKRD20A12PQ8NF67 263 aa27.73■■■□□ 2.03
LMO2-201ENST00000257818 TTC26A0AVF1 554 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 TUBBP07437 444 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 MCM7P33993 719 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 EVX2Q03828 476 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 FAM71BQ8TC56 605 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 DLEC1Q9Y238 1755 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 VGLL3A8MV65 326 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 USP17L12C9JPN9 530 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 USP17L21D6R901 530 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 TRIM66O15016 1216 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 DZIP1Q86YF9 867 aaKnown RBP27.72■■■□□ 2.03
LMO2-201ENST00000257818 CCDC102AQ96A19 550 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 HDAC6Q9UBN7 1215 aa27.72■■■□□ 2.03
LMO2-201ENST00000257818 BAZ2BQ9UIF8 2168 aaKnown RBP27.72■■■□□ 2.03
LMO2-201ENST00000257818 VEGFAP15692 232 aaPredicted RBP27.71■■■□□ 2.03
LMO2-201ENST00000257818 LEKR1Q6ZMV7 388 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 SRLQ86TD4 932 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 TRIM49BA6NDI0 452 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 PSMD14O00487 310 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 ENC1O14682 589 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 PHACTR2O75167 634 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 UFL1O94874 794 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 PARP1P09874 1014 aaKnown RBP27.71■■■□□ 2.03
LMO2-201ENST00000257818 CALM1P0DP23 149 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 CALM2P0DP24 149 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 CALM3P0DP25 149 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 ZNF804AQ7Z570 1209 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 TFR2Q9UP52 801 aa27.71■■■□□ 2.03
LMO2-201ENST00000257818 DDAH1O94760 285 aa27.7■■■□□ 2.03
LMO2-201ENST00000257818 HERVK_113P62684 666 aa27.7■■■□□ 2.03
LMO2-201ENST00000257818 GRIK5Q16478 980 aa27.7■■■□□ 2.03
LMO2-201ENST00000257818 SPTY2D1Q68D10 685 aaPredicted RBP27.7■■■□□ 2.03
LMO2-201ENST00000257818 IQCA1Q86XH1 822 aa27.7■■■□□ 2.03
LMO2-201ENST00000257818 PYM1Q9BRP8 204 aaKnown RBP27.7■■■□□ 2.03
LMO2-201ENST00000257818 TRIM34Q9BYJ4 488 aa27.7■■■□□ 2.03
LMO2-201ENST00000257818 CRNKL1Q9BZJ0 848 aaKnown RBP27.7■■■□□ 2.03
LMO2-201ENST00000257818 RMND1Q9NWS8 449 aa27.7■■■□□ 2.03
LMO2-201ENST00000257818 RPS6KA5O75582 802 aa27.7■■■□□ 2.02
LMO2-201ENST00000257818 APBA3O96018 575 aa27.7■■■□□ 2.02
LMO2-201ENST00000257818 FGRP09769 529 aa27.7■■■□□ 2.02
LMO2-201ENST00000257818 FOXR1Q6PIV2 292 aa27.7■■■□□ 2.02
LMO2-201ENST00000257818 MB21D1Q8N884 522 aa27.7■■■□□ 2.02
LMO2-201ENST00000257818 OR8K1Q8NGG5 319 aa27.7■■■□□ 2.02
LMO2-201ENST00000257818 DNAJC7Q99615 494 aa27.7■■■□□ 2.02
LMO2-201ENST00000257818 DCP1AQ9NPI6 582 aaPredicted RBP27.7■■■□□ 2.02
LMO2-201ENST00000257818 TRAPPC10P48553 1259 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 USP14P54578 494 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 WDR59Q6PJI9 974 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 WDR66Q8TBY9 1149 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 RRP15Q9Y3B9 282 aaKnown RBP27.69■■■□□ 2.02
LMO2-201ENST00000257818 H7C1D1 291 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 ATP1A1P05023 1023 aaKnown RBP27.69■■■□□ 2.02
LMO2-201ENST00000257818 LDHBP07195 334 aaKnown RBP27.69■■■□□ 2.02
LMO2-201ENST00000257818 PMS1P54277 932 aaKnown RBP27.69■■■□□ 2.02
LMO2-201ENST00000257818 NLRP5P59047 1200 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 HSP90B2PQ58FF3 399 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 CCDC148Q8NFR7 591 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 HAUS4Q9H6D7 363 aa27.69■■■□□ 2.02
LMO2-201ENST00000257818 MAST2Q6P0Q8 1798 aa27.68■■■□□ 2.02
LMO2-201ENST00000257818 ZNF772Q68DY9 489 aaPredicted RBP27.68■■■□□ 2.02
LMO2-201ENST00000257818 ADSSL1Q8N142 457 aa27.68■■■□□ 2.02
LMO2-201ENST00000257818 C4orf32Q8N8J7 132 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms