RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LRMPQ12912 555 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 TOM1L2Q6ZVM7 507 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 IL17RAQ96F46 866 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 CDC42BPBQ9Y5S2 1711 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 FESP07332 822 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 CABP4P57796 275 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 NEK5Q6P3R8 708 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 TBC1D1Q86TI0 1168 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 ZBTB8BQ8NAP8 495 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 DNAJC25Q9H1X3 360 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 BTBD7Q9P203 1132 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 LZTS1Q9Y250 596 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 EFCAB6Q5THR3 1501 aa7.4□□□□□ -1.22
PDGFRA-201ENST00000257290 SNTNA6NMZ2 147 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 STMND1H3BQB6 276 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT10P13645 584 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 GABPB2Q8TAK5 448 aaPredicted RBP7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 APPBP2Q92624 585 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 ATP6V1HQ9UI12 483 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 ZNF180Q9UJW8 692 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 TMEM2Q9UHN6 1383 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 M0R2C6 588 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 SLC4A2P04920 1241 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 HSPA1LP34931 641 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 ARL1P40616 181 aaPredicted RBP7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 DR1Q01658 176 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 C1QTNF12Q5T7M4 302 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 CYB5D1Q6P9G0 228 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 CHD1LQ86WJ1 897 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 GID8Q9NWU2 228 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 A0A1W2PP64 1363 aa7.4□□□□□ -1.23
PDGFRA-201ENST00000257290 RHOBTB1O94844 696 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PRLP01236 227 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 HEATR3Q7Z4Q2 680 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 AS3MTQ9HBK9 375 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 SYNRGQ9UMZ2 1314 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 YEATS4O95619 227 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC166P0CW27 439 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 SAFBQ15424 915 aaKnown RBP eCLIP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 USH1GQ495M9 461 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PDXDC1Q6P996 788 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 LRRC8AQ8IWT6 810 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 SNX29Q8TEQ0 813 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 GABBR1Q9UBS5 961 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 MSH6P52701 1360 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 E7ENQ6 273 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 LIN7AO14910 233 aaPredicted RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PLA2G4AP47712 749 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ESRRGP62508 458 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 MRPS15P82914 257 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ZBTB16Q05516 673 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 LETM2Q2VYF4 491 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC82Q8N4S0 544 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 AGBL1Q96MI9 1066 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PRDM11Q9NQV5 511 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PICK1Q9NRD5 415 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 NDUFA13Q9P0J0 144 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 DLGAP2Q9P1A6 1054 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 SBNO2Q9Y2G9 1366 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 SNX2O60749 519 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 GNAI2P04899 355 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 MMEP08473 750 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 HDAC4P56524 1084 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 KARSQ15046 597 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 TMC5Q6UXY8 1006 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ZC3H15Q8WU90 426 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 KIFAP3Q92845 792 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 SYTL4Q96C24 671 aaPredicted RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 DYDC2Q96IM9 177 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 CAAP1Q9H8G2 361 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 MRPL40Q9NQ50 206 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ZBTB21Q9ULJ3 1066 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PCDHGA3Q9Y5H0 932 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 PRDM15P57071 1507 aaPredicted RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 GOLGA8IPA6NC78 632 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 TRIM43BA6NCK2 446 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 BTBD11A6QL63 1104 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 APOL1O14791 398 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ATP4AP20648 1035 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 UBASH3AP57075 661 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 CWF19L2Q2TBE0 894 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 LRRC31Q6UY01 552 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 KRT28Q7Z3Y7 464 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 LRRC49Q8IUZ0 686 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 VPS52Q8N1B4 723 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 DCLK2Q8N568 766 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 MKL1Q969V6 931 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 LRRC59Q96AG4 307 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 CCDC138Q96M89 665 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ZNF304Q9HCX3 659 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 DMAP1Q9NPF5 467 aaPredicted RBP7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ARHGAP31Q2M1Z3 1444 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 RNF123Q5XPI4 1314 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 ERVK-7P63135 1459 aa7.39□□□□□ -1.23
PDGFRA-201ENST00000257290 NAT2P11245 290 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms