RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 SIN3BO75182 1162 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 LIG1P18858 919 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 PIP4K2BP78356 416 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 SAFBQ15424 915 aaKnown RBP eCLIP6.31□□□□□ -1.4
TCN1-201ENST00000257264 DBN1Q16643 649 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 ARHGAP29Q52LW3 1261 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 ANKRD39Q53RE8 183 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 ZC3H12AQ5D1E8 599 aaKnown RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 SLC6A19Q695T7 634 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 GDF6Q6KF10 455 aaPredicted RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 ERAP2Q6P179 960 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 TRIM67Q6ZTA4 783 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 TRIM59Q8IWR1 403 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 CPA6Q8N4T0 437 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 WNT8BQ93098 351 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 RCC1LQ96I51 464 aaKnown RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 CCDC140Q96MF4 163 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 MAN1C1Q9NR34 630 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 FRRS1LQ9P0K9 344 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 TJP2Q9UDY2 1190 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 EMC9Q9Y3B6 208 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 FAM181BA6NEQ2 426 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 FKBP9O95302 570 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 SLFN14P0C7P3 912 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 BDNFP23560 247 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 CDC25BP30305 580 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 SETQ01105 290 aaPredicted RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 MAP4K2Q12851 820 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 SKOR2Q2VWA4 1001 aaPredicted RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 FAM117BQ6P1L5 589 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 FKBP9P1Q75LS8 142 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 PODNQ7Z5L7 613 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 PCGF5Q86SE9 256 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 FCHSD1Q86WN1 690 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 MRPL41Q8IXM3 137 aaKnown RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 SMAP1Q8IYB5 467 aaPredicted RBP6.31□□□□□ -1.4
TCN1-201ENST00000257264 BTN2A2Q8WVV5 523 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 GMCL1Q96IK5 515 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 NRSN2Q9GZP1 204 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 SAMD15Q9P1V8 674 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 ZBTB21Q9ULJ3 1066 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 ZNF451Q9Y4E5 1061 aa6.31□□□□□ -1.4
TCN1-201ENST00000257264 AQP7O14520 342 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 APAF1O14727 1248 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 FANCGO15287 622 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 CRTAMO95727 393 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 NAT1P18440 290 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 CD247P20963 164 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
TCN1-201ENST00000257264 ADCYAP1R1P41586 468 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 RING1Q06587 406 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 INAVAQ3KP66 663 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 ATP13A4Q4VNC1 1196 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 HP1BP3Q5SSJ5 553 aaPredicted RBP6.3□□□□□ -1.4
TCN1-201ENST00000257264 TMEM240Q5SV17 173 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 ZNF468Q5VIY5 522 aaPredicted RBP6.3□□□□□ -1.4
TCN1-201ENST00000257264 EPM2AIP1Q7L775 607 aaPredicted RBP6.3□□□□□ -1.4
TCN1-201ENST00000257264 HID1Q8IV36 788 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 TTC9Q92623 222 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 WDR89Q96FK6 387 aaPredicted RBP6.3□□□□□ -1.4
TCN1-201ENST00000257264 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 LZTS1Q9Y250 596 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 HIF3AQ9Y2N7 669 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 ARHGAP35Q9NRY4 1499 aa6.3□□□□□ -1.4
TCN1-201ENST00000257264 FHAD1B1AJZ9 1412 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 FRMPD2Q68DX3 1309 aaPredicted RBP6.29□□□□□ -1.4
TCN1-201ENST00000257264 TIAM1Q13009 1591 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 ZNF891A8MT65 544 aaPredicted RBP6.29□□□□□ -1.4
TCN1-201ENST00000257264 WIPF1O43516 503 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 MAN1A2O60476 641 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 GAS7O60861 476 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 ULK1O75385 1050 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 MT-CO1P00395 513 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 LTFP02788 710 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 HSP90AA1P07900 732 aaKnown RBP6.29□□□□□ -1.4
TCN1-201ENST00000257264 BMP1P13497 986 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 VCAM1P19320 739 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 KCNJ6P48051 423 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 TRAPPC10P48553 1259 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 GFRA1P56159 465 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 ZNF280AP59817 542 aaPredicted RBP6.29□□□□□ -1.4
TCN1-201ENST00000257264 ERVK-21P61565 698 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 OCRLQ01968 901 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
TCN1-201ENST00000257264 GRM3Q14832 879 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 MAPRE1Q15691 268 aaKnown RBP6.29□□□□□ -1.4
TCN1-201ENST00000257264 NTRK3Q16288 839 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 ANO1Q5XXA6 986 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 PNMA8AQ86V59 439 aaPredicted RBP6.29□□□□□ -1.4
TCN1-201ENST00000257264 C11orf74Q86VG3 221 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 AMOTL1Q8IY63 956 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 NXPE1Q8N323 547 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 TMTC2Q8N394 836 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 ARHGEF39Q8N4T4 335 aa6.29□□□□□ -1.4
TCN1-201ENST00000257264 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms