RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 STAG2Q8N3U4 1231 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 MTRQ99707 1265 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 SELENOOQ9BVL4 669 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 MAP2K7O14733 419 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 SCG2P13521 617 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 EIF6P56537 245 aaKnown RBP13.38□□□□□ -0.27
USHBP1-201ENST00000252597 TFAP4Q01664 338 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 APTXQ7Z2E3 356 aaKnown RBP13.38□□□□□ -0.27
USHBP1-201ENST00000252597 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
USHBP1-201ENST00000252597 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
USHBP1-201ENST00000252597 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 GTPBP6O43824 516 aaPredicted RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 USP17L8P0C7I0 530 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 CCDC152Q4G0S7 254 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 NFRKBQ6P4R8 1299 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 SECISBP2LQ93073 1101 aaKnown RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 TULP2O00295 520 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 GNAT2P19087 354 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 KRT83P78385 493 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 CDKAL1Q5VV42 579 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 DNAAF5Q86Y56 855 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 CCDC155Q8N6L0 562 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 PACSIN2Q9UNF0 486 aaPredicted RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 REXO2Q9Y3B8 237 aaKnown RBP13.37□□□□□ -0.27
USHBP1-201ENST00000252597 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
USHBP1-201ENST00000252597 PDE2AO00408 941 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 NKRFO15226 690 aaKnown RBP eCLIP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 COG1Q8WTW3 980 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 LRRC1Q9BTT6 524 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 TCP11L1Q9NUJ3 509 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 STK36Q9NRP7 1315 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 BACH1O14867 736 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 PDCLQ13371 301 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 ZNF658Q5TYW1 1059 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 MAATS1Q7Z4T9 603 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 DZIP1Q86YF9 867 aaKnown RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 PHF20Q9BVI0 1012 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 DMGDHQ9UI17 866 aaKnown RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 RWDD2AQ9UIY3 292 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 ABCC6O95255 1503 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 EBAG9O00559 213 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 KLRK1P26718 216 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 PRDX5P30044 214 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
USHBP1-201ENST00000252597 RASSF7Q02833 373 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 IL17AQ16552 155 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 KLHL7Q8IXQ5 586 aa13.36□□□□□ -0.27
USHBP1-201ENST00000252597 MROH5Q6ZUA9 1318 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 USO1O60763 962 aaKnown RBP13.35□□□□□ -0.27
USHBP1-201ENST00000252597 PAFAH1B1P43034 410 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 USP14P54578 494 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 HERVK_113P62684 666 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 PACS2Q86VP3 889 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 BLIDQ8IZY5 108 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 GJA10Q969M2 543 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 FAM237AA0A1B0GTK4 181 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 NDUFAB1O14561 156 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 ARID4AP29374 1257 aaPredicted RBP13.35□□□□□ -0.27
USHBP1-201ENST00000252597 NAPAP54920 295 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
USHBP1-201ENST00000252597 MUM1L1Q5H9M0 696 aa13.35□□□□□ -0.27
USHBP1-201ENST00000252597 MRC1P22897 1456 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 ZSCAN5CA6NGD5 496 aaPredicted RBP13.34□□□□□ -0.27
USHBP1-201ENST00000252597 TACC1O75410 805 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 NT5DC1Q5TFE4 455 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 FBXW10Q5XX13 1052 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 NELFCDQ8IXH7 590 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 VGLL2Q8N8G2 317 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 GPR101Q96P66 508 aaPredicted RBP13.34□□□□□ -0.27
USHBP1-201ENST00000252597 UBA5Q9GZZ9 404 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 RIC1Q4ADV7 1423 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 EXOC5O00471 708 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 FTCDO95954 541 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 MAGEA1P43355 309 aa13.34□□□□□ -0.27
USHBP1-201ENST00000252597 CKAP4Q07065 602 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms