RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 FLAD1Q8NFF5 587 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 PSDA5PKW4 1024 aaPredicted RBP24.51■■□□□ 1.51
CLN6-201ENST00000249806 TEX33O43247 280 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 CACNB3P54284 484 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 KIAA0825Q8IV33 1275 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 TMEM260Q9NX78 707 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 A0A1B0GTH6 734 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 CTIFO43310 598 aaKnown RBP24.5■■□□□ 1.51
CLN6-201ENST00000249806 TTLL1O95922 423 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 RPN1P04843 607 aaKnown RBP24.5■■□□□ 1.51
CLN6-201ENST00000249806 CRKP46108 304 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 KCNJ6P48051 423 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 C2CD5Q86YS7 1000 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 CCDC112Q8NEF3 446 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 TBCKQ8TEA7 893 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 LAD1O00515 517 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 SNHG28P0DPA3 235 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 ADKP55263 362 aaKnown RBP24.5■■□□□ 1.51
CLN6-201ENST00000249806 CDKAL1Q5VV42 579 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 PODNQ7Z5L7 613 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 LRRC15Q8TF66 581 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 SWAP70Q9UH65 585 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 MAPK8IP1Q9UQF2 711 aa24.5■■□□□ 1.51
CLN6-201ENST00000249806 MPHOSPH10O00566 681 aaKnown RBP24.49■■□□□ 1.51
CLN6-201ENST00000249806 ASPRV1Q53RT3 343 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 NEK8Q86SG6 692 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 TMEM139Q8IV31 216 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 REXO1Q8N1G1 1221 aaKnown RBP24.49■■□□□ 1.51
CLN6-201ENST00000249806 PRPHP41219 470 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 ATP2B2Q01814 1243 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 TC2NQ8N9U0 490 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 CCSER1Q9C0I3 900 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 GDAQ9Y2T3 454 aa24.49■■□□□ 1.51
CLN6-201ENST00000249806 TCP10Q12799 353 aa24.48■■□□□ 1.51
CLN6-201ENST00000249806 ZNF658Q5TYW1 1059 aaPredicted RBP24.48■■□□□ 1.51
CLN6-201ENST00000249806 PDCL3Q9H2J4 239 aa24.48■■□□□ 1.51
CLN6-201ENST00000249806 OR52Z1P0C646 297 aa24.47■■□□□ 1.51
CLN6-201ENST00000249806 TTBK2Q6IQ55 1244 aa24.47■■□□□ 1.51
CLN6-201ENST00000249806 ADD3Q9UEY8 706 aaKnown RBP24.47■■□□□ 1.51
CLN6-201ENST00000249806 FAM196BA6NMK8 535 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 HLA-DOAP06340 250 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 TECP42680 631 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 PRCPP42785 496 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 ZNF543Q08ER8 600 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 ADGRF4Q8IZF3 695 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 ZDHHC15Q96MV8 337 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 JMJD4Q9H9V9 463 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 SCN9AQ15858 1988 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 ESYT2A0FGR8 921 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 H0YIN7 160 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 CHRNA5P30532 468 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 SLC16A2P36021 539 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 RBM5P52756 815 aaKnown RBP eCLIP24.46■■□□□ 1.51
CLN6-201ENST00000249806 ZNF772Q68DY9 489 aaPredicted RBP24.46■■□□□ 1.51
CLN6-201ENST00000249806 KIF18AQ8NI77 898 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 DNAJC18Q9H819 358 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 RMND1Q9NWS8 449 aa24.46■■□□□ 1.51
CLN6-201ENST00000249806 SLX4Q8IY92 1834 aa24.45■■□□□ 1.51
CLN6-201ENST00000249806 PAK1Q13153 545 aa24.45■■□□□ 1.5
CLN6-201ENST00000249806 SHROOM1Q2M3G4 852 aaPredicted RBP24.45■■□□□ 1.5
CLN6-201ENST00000249806 POTEDQ86YR6 584 aa24.45■■□□□ 1.5
CLN6-201ENST00000249806 NELFBQ8WX92 580 aa24.45■■□□□ 1.5
CLN6-201ENST00000249806 BAG1Q99933 345 aaPredicted RBP24.45■■□□□ 1.5
CLN6-201ENST00000249806 RWDD2AQ9UIY3 292 aa24.45■■□□□ 1.5
CLN6-201ENST00000249806 KCTD1Q719H9 257 aa24.45■■□□□ 1.5
CLN6-201ENST00000249806 CABP7Q86V35 215 aa24.45■■□□□ 1.5
CLN6-201ENST00000249806 KBTBD4Q9NVX7 518 aa24.45■■□□□ 1.5
CLN6-201ENST00000249806 ECE2O60344 883 aa24.44■■□□□ 1.5
CLN6-201ENST00000249806 PPP1R11O60927 126 aaPredicted RBP24.44■■□□□ 1.5
CLN6-201ENST00000249806 PLCG1P19174 1290 aa24.44■■□□□ 1.5
CLN6-201ENST00000249806 NAA30Q147X3 362 aaPredicted RBP24.44■■□□□ 1.5
CLN6-201ENST00000249806 DACT2Q5SW24 774 aa24.44■■□□□ 1.5
CLN6-201ENST00000249806 SYT10Q6XYQ8 523 aa24.44■■□□□ 1.5
CLN6-201ENST00000249806 MYH4Q9Y623 1939 aa24.44■■□□□ 1.5
CLN6-201ENST00000249806 MYO3BQ8WXR4 1341 aa24.44■■□□□ 1.5
CLN6-201ENST00000249806 DDTLA6NHG4 134 aaPredicted RBP24.43■■□□□ 1.5
CLN6-201ENST00000249806 EDIL3O43854 480 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 ADCY7P51828 1080 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 KMT5BQ4FZB7 885 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 STRIP1Q5VSL9 837 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 AK8Q96MA6 479 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 hCG_1984214I3L0E3 225 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 ARHGAP6O43182 974 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 KLRC4O43908 158 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 CCT6AP40227 531 aaKnown RBP24.43■■□□□ 1.5
CLN6-201ENST00000249806 ZNF713Q8N859 430 aaPredicted RBP24.43■■□□□ 1.5
CLN6-201ENST00000249806 CTAGE1Q96RT6 745 aa24.43■■□□□ 1.5
CLN6-201ENST00000249806 PNMA6FA0A0J9YX94 578 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 KIF2AO00139 706 aaPredicted RBP24.42■■□□□ 1.5
CLN6-201ENST00000249806 TXKP42681 527 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 CCDC96Q2M329 555 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 CREBRFQ8IUR6 639 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 CPLX3Q8WVH0 158 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 FAM198AQ9UFP1 575 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 PBX1P40424 430 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 KRT31Q15323 416 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 REXO1L1PQ8IX06 675 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 IGSF22Q8N9C0 903 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 EHD4Q9H223 541 aa24.42■■□□□ 1.5
CLN6-201ENST00000249806 TRIM49BA6NDI0 452 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms