RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LRRC37AA6NMS7 1700 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 SMCO2A6NFE2 343 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 KCNJ18B7U540 433 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 C6orf229H3BNL8 230 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 N4BP3O15049 544 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 KLRC4O43908 158 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 PRPHP41219 470 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 NOVP48745 357 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 COPB1P53618 953 aaKnown RBP22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 KCNJ12Q14500 433 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 VAT1LQ9HCJ6 419 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 KBTBD4Q9NVX7 518 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 TAB2Q9NYJ8 693 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 OGFRQ9NZT2 677 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 DAGLAQ9Y4D2 1042 aa22.03■■□□□ 1.12
CDC42EP1-201ENST00000249014 TRIM49BA6NDI0 452 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 MEX3CQ5U5Q3 659 aaKnown RBP22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 ADSSL1Q8N142 457 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 TBC1D22AQ8WUA7 517 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 KIFC2Q96AC6 838 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 RRP36Q96EU6 259 aaKnown RBP22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 PIGSQ96S52 555 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 NAA15Q9BXJ9 866 aaKnown RBP22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 ADGRG1Q9Y653 693 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 AFF2P51816 1311 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 A0A0U1RQJ8 604 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 USP17L5A8MUK1 530 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 CCDC175P0C221 793 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 CASQ1P31415 396 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 PMS1P54277 932 aaKnown RBP22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 LETM2Q2VYF4 491 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 KRT25Q7Z3Z0 450 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 IRF2BP1Q8IU81 584 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 SLF2Q8IX21 1173 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 ATRIPQ8WXE1 791 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 UBA5Q9GZZ9 404 aa22.02■■□□□ 1.12
CDC42EP1-201ENST00000249014 RNF225M0QZC1 329 aaPredicted RBP22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 POLRMTO00411 1230 aaKnown RBP22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 CCNT1O60563 726 aaKnown RBP22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 GTF2IP78347 998 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 SPAG1Q07617 926 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 NONOQ15233 471 aaKnown RBP eCLIP22.01■■□□□ 1.111e-6■■■■□ 25.5
CDC42EP1-201ENST00000249014 CREBRFQ8IUR6 639 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 CCDC12Q8WUD4 166 aaPredicted RBP22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 CRAMP1Q96RY5 1269 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 CARD6Q9BX69 1037 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 IRX2Q9BZI1 471 aaPredicted RBP22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 H2AFXP16104 143 aaPredicted RBP22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 KCNB1Q14721 858 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 TXNRD1Q16881 649 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 SRRTQ9BXP5 876 aaKnown RBP22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 C6orf50Q9HD87 102 aa22.01■■□□□ 1.11
CDC42EP1-201ENST00000249014 OR52Z1P0C646 297 aa22■■□□□ 1.11
CDC42EP1-201ENST00000249014 SMARCA1P28370 1054 aa22■■□□□ 1.11
CDC42EP1-201ENST00000249014 CNGA4Q8IV77 575 aa22■■□□□ 1.11
CDC42EP1-201ENST00000249014 SEC63Q9UGP8 760 aaKnown RBP22■■□□□ 1.11
CDC42EP1-201ENST00000249014 PDHBP11177 359 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 PLCG1P19174 1290 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 FECHP22830 423 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 GNA11P29992 359 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 MAP3K9P80192 1104 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 PICALMQ13492 652 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 ARHGAP29Q52LW3 1261 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 ZNF446Q9NWS9 450 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 FRMPD2Q68DX3 1309 aaPredicted RBP21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 KLRG2A4D1S0 409 aaPredicted RBP21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 H7C1D1 291 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 RIMBP2O15034 1052 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 TADA3O75528 432 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 RHOBTB3O94955 611 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 ZSCAN20P17040 1043 aaPredicted RBP21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 NEK8Q86SG6 692 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 CABP7Q86V35 215 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 MNS1Q8NEH6 495 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 ZMYND15Q9H091 742 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 RIOX1Q9H6W3 641 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 LZTFL1Q9NQ48 299 aa21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 BIN2Q9UBW5 565 aaPredicted RBP21.99■■□□□ 1.11
CDC42EP1-201ENST00000249014 MYL1P05976 194 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 GABPAQ06546 454 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 TBCKQ8TEA7 893 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 CCDC51Q96ER9 411 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 TMEM260Q9NX78 707 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 ANKRD31Q8N7Z5 1873 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 SOGA3Q5TF21 947 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 JAKMIP3Q5VZ66 844 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 GIMAP8Q8ND71 665 aaPredicted RBP21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 ANKRD20A12PQ8NF67 263 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 UBXN4Q92575 508 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 AK8Q96MA6 479 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 ABHD10Q9NUJ1 306 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 MTMR4Q9NYA4 1195 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 MRFAP1Q9Y605 127 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 PLIN4Q96Q06 1357 aa21.98■■□□□ 1.11
CDC42EP1-201ENST00000249014 F8W031 263 aaPredicted RBP21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 PPEF1O14829 653 aaPredicted RBP21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 ERVK-24P63145 666 aa21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 CLEC10AQ8IUN9 316 aa21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 LRRC47Q8N1G4 583 aaKnown RBP21.97■■□□□ 1.11
CDC42EP1-201ENST00000249014 CERS5Q8N5B7 392 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms