RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 ZNF713Q8N859 430 aaPredicted RBP20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 GLIS2Q9BZE0 524 aaPredicted RBP20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 CTAGE5O15320 804 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 PTPREP23469 700 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 MCM7P33993 719 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 INF2Q27J81 1249 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 ANO6Q4KMQ2 910 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 RESP18Q5W5W9 173 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 FAM177A1Q8N128 213 aaPredicted RBP20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 MTMR8Q96EF0 704 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 GGA3Q9NZ52 723 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 BIN2Q9UBW5 565 aaPredicted RBP20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 TMX2Q9Y320 296 aa20.49■□□□□ 0.87
KLHDC3-201ENST00000244670 TRAPPC10P48553 1259 aa20.48■□□□□ 0.87
KLHDC3-201ENST00000244670 HIRAP54198 1017 aaPredicted RBP20.48■□□□□ 0.87
KLHDC3-201ENST00000244670 CDC37Q16543 378 aaPredicted RBP20.48■□□□□ 0.87
KLHDC3-201ENST00000244670 QRICH1Q2TAL8 776 aa20.48■□□□□ 0.87
KLHDC3-201ENST00000244670 SASS6Q6UVJ0 657 aa20.48■□□□□ 0.87
KLHDC3-201ENST00000244670 ASNSP08243 561 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 JAKMIP3Q5VZ66 844 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 FAM200AQ8TCP9 573 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 GOPCQ9HD26 462 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 TMEM260Q9NX78 707 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 USP25Q9UHP3 1055 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 SRPRBQ9Y5M8 271 aaKnown RBP20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 ESYT2A0FGR8 921 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 ESPNB1AK53 854 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 ZNF202O95125 648 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 ADCY7P51828 1080 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 PTGDRQ13258 359 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 C9orf131Q5VYM1 1079 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 REXO1Q8N1G1 1221 aaKnown RBP20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 ERCC4Q92889 916 aaPredicted RBP20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 HPSEQ9Y251 543 aa20.47■□□□□ 0.87
KLHDC3-201ENST00000244670 POLR2AP24928 1970 aaKnown RBP20.46■□□□□ 0.87
KLHDC3-201ENST00000244670 SYKP43405 635 aa20.46■□□□□ 0.87
KLHDC3-201ENST00000244670 FAM83BQ5T0W9 1011 aa20.46■□□□□ 0.87
KLHDC3-201ENST00000244670 SYDE2Q5VT97 1194 aa20.46■□□□□ 0.87
KLHDC3-201ENST00000244670 APOBEC3FQ8IUX4 373 aaKnown RBP20.46■□□□□ 0.87
KLHDC3-201ENST00000244670 CSRNP2Q9H175 543 aa20.46■□□□□ 0.87
KLHDC3-201ENST00000244670 SYNPO2Q9UMS6 1093 aa20.46■□□□□ 0.87
KLHDC3-201ENST00000244670 KRT25Q7Z3Z0 450 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 SDF4Q9BRK5 362 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 FAM237AA0A1B0GTK4 181 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 BMP15O95972 392 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 INPP5BP32019 993 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 ATP2C1P98194 919 aaPredicted RBP20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 NONOQ15233 471 aaKnown RBP eCLIP20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 PPP1R18Q6NYC8 613 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 ZNF341Q9BYN7 854 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 DNAJC25Q9H1X3 360 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 VCPKMTQ9H867 229 aa20.45■□□□□ 0.86
KLHDC3-201ENST00000244670 TAL1P17542 331 aaPredicted RBP20.44■□□□□ 0.86
KLHDC3-201ENST00000244670 UBE2SQ16763 222 aa20.44■□□□□ 0.86
KLHDC3-201ENST00000244670 LUZP1Q86V48 1076 aa20.44■□□□□ 0.86
KLHDC3-201ENST00000244670 CBX8Q9HC52 389 aa20.44■□□□□ 0.86
KLHDC3-201ENST00000244670 KCNH3Q9ULD8 1083 aa20.44■□□□□ 0.86
KLHDC3-201ENST00000244670 PCDHA1Q9Y5I3 950 aa20.44■□□□□ 0.86
KLHDC3-201ENST00000244670 A0A087WWV3 80 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 VWA3AA6NCI4 1184 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 AP5Z1O43299 807 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 LMOD1P29536 600 aaPredicted RBP20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 USP49Q70CQ1 688 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 FEZ1Q99689 392 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 SH2D4AQ9H788 454 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 STAT2P52630 851 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 USH1GQ495M9 461 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 SAMD1Q6SPF0 538 aaPredicted RBP20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 BTNL9Q6UXG8 535 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 RIC8AQ9NPQ8 531 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 FAM13BQ9NYF5 915 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 PRR12Q9ULL5 1215 aa20.43■□□□□ 0.86
KLHDC3-201ENST00000244670 CTNND1O60716 968 aaKnown RBP20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 LETM2Q2VYF4 491 aa20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 DCAF15Q66K64 600 aa20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 C11orf57Q6ZUT1 292 aaPredicted RBP20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 ZNF579Q8NAF0 562 aaKnown RBP20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 TBCKQ8TEA7 893 aa20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 CUL5Q93034 780 aa20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 FERMT2Q96AC1 680 aa20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 MORC2Q9Y6X9 1032 aaPredicted RBP20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 DOCK1Q14185 1865 aa20.42■□□□□ 0.86
KLHDC3-201ENST00000244670 CLCN1P35523 988 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 DGKZQ13574 1117 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 STX1AQ16623 288 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 C4orf32Q8N8J7 132 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 CCNT1O60563 726 aaKnown RBP20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 ADCY5O95622 1261 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 IL17AQ16552 155 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 NEK8Q86SG6 692 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 PDILTQ8N807 584 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 EPSTI1Q96J88 318 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 AMNQ9BXJ7 453 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 TMEM60Q9H2L4 133 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 SMCHD1A6NHR9 2005 aa20.41■□□□□ 0.86
KLHDC3-201ENST00000244670 ZNF165P49910 485 aa20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 LONRF3Q496Y0 759 aa20.4■□□□□ 0.86
KLHDC3-201ENST00000244670 DLK2Q6UY11 383 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms