RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 CPLX2Q6PUV4 134 aaKnown RBP23.33■■□□□ 1.32
SNRPA-201ENST00000243563 SLC38A10Q9HBR0 1119 aa23.33■■□□□ 1.32
SNRPA-201ENST00000243563 BTBD7Q9P203 1132 aa23.33■■□□□ 1.32
SNRPA-201ENST00000243563 ZBTB5O15062 677 aa23.32■■□□□ 1.32
SNRPA-201ENST00000243563 CDKL5O76039 1030 aa23.32■■□□□ 1.32
SNRPA-201ENST00000243563 RRP36Q96EU6 259 aaKnown RBP23.32■■□□□ 1.32
SNRPA-201ENST00000243563 TXNRD2Q9NNW7 524 aa23.32■■□□□ 1.32
SNRPA-201ENST00000243563 SMC3Q9UQE7 1217 aa23.32■■□□□ 1.32
SNRPA-201ENST00000243563 SLC45A1Q9Y2W3 748 aa23.32■■□□□ 1.32
SNRPA-201ENST00000243563 MYPNQ86TC9 1320 aa23.31■■□□□ 1.32
SNRPA-201ENST00000243563 OSBPP22059 807 aa23.31■■□□□ 1.32
SNRPA-201ENST00000243563 TMEM132BQ14DG7 1078 aa23.31■■□□□ 1.32
SNRPA-201ENST00000243563 WWC2Q6AWC2 1192 aa23.31■■□□□ 1.32
SNRPA-201ENST00000243563 AGBL1Q96MI9 1066 aa23.31■■□□□ 1.32
SNRPA-201ENST00000243563 RAVER2Q9HCJ3 691 aaKnown RBP23.31■■□□□ 1.32
SNRPA-201ENST00000243563 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.31■■□□□ 1.32
SNRPA-201ENST00000243563 ADGRA2Q96PE1 1338 aa23.31■■□□□ 1.32
SNRPA-201ENST00000243563 RBBP6Q7Z6E9 1792 aaKnown RBP23.3■■□□□ 1.32
SNRPA-201ENST00000243563 PNMA6FA0A0J9YX94 578 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 ADAMTS3O15072 1205 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 PABPC4Q13310 644 aaKnown RBP eCLIP23.3■■□□□ 1.326e-11■□□□□ 10.8
SNRPA-201ENST00000243563 PFKFB3Q16875 520 aaPredicted RBP23.3■■□□□ 1.32
SNRPA-201ENST00000243563 TRIM22Q8IYM9 498 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 COA7Q96BR5 231 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 R3HDMLQ9H3Y0 253 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 HOXC10Q9NYD6 342 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 DEXIO95424 95 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 SCG2P13521 617 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 SREBF2Q12772 1141 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 OTUD7BQ6GQQ9 843 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 LBX2Q6XYB7 198 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 CPXCR1Q8N123 301 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 IPO9Q96P70 1041 aaKnown RBP23.3■■□□□ 1.32
SNRPA-201ENST00000243563 RBPJLQ9UBG7 517 aa23.3■■□□□ 1.32
SNRPA-201ENST00000243563 ZNF214Q9UL59 606 aaPredicted RBP23.3■■□□□ 1.32
SNRPA-201ENST00000243563 HSP90AA1P07900 732 aaKnown RBP23.29■■□□□ 1.32
SNRPA-201ENST00000243563 USH1GQ495M9 461 aa23.29■■□□□ 1.32
SNRPA-201ENST00000243563 ALG1Q9BT22 464 aa23.29■■□□□ 1.32
SNRPA-201ENST00000243563 VPS54Q9P1Q0 977 aa23.29■■□□□ 1.32
SNRPA-201ENST00000243563 ZSWIM8A7E2V4 1837 aa23.28■■□□□ 1.32
SNRPA-201ENST00000243563 STXBP3O00186 592 aa23.28■■□□□ 1.32
SNRPA-201ENST00000243563 INHBEP58166 350 aa23.28■■□□□ 1.32
SNRPA-201ENST00000243563 HMGN5P82970 282 aaKnown RBP23.28■■□□□ 1.32
SNRPA-201ENST00000243563 HEATR3Q7Z4Q2 680 aa23.28■■□□□ 1.32
SNRPA-201ENST00000243563 PAGR1Q9BTK6 254 aa23.28■■□□□ 1.32
SNRPA-201ENST00000243563 SEC63Q9UGP8 760 aaKnown RBP23.28■■□□□ 1.32
SNRPA-201ENST00000243563 RIPK3Q9Y572 518 aa23.28■■□□□ 1.32
SNRPA-201ENST00000243563 ZBED4O75132 1171 aa23.27■■□□□ 1.32
SNRPA-201ENST00000243563 AKAP17AQ02040 695 aaKnown RBP23.27■■□□□ 1.32
SNRPA-201ENST00000243563 TAF1CQ15572 869 aaPredicted RBP23.27■■□□□ 1.32
SNRPA-201ENST00000243563 Q3C1V9 767 aa23.27■■□□□ 1.32
SNRPA-201ENST00000243563 PNMA3Q9UL41 463 aa23.27■■□□□ 1.32
SNRPA-201ENST00000243563 PCNTO95613 3336 aa23.27■■□□□ 1.32
SNRPA-201ENST00000243563 ICAM1P05362 532 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 FBXO11Q86XK2 927 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 OPLAHO14841 1288 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 GUCY1B3Q02153 619 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 CRHR2Q13324 411 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 SMCR8Q8TEV9 937 aaPredicted RBP23.26■■□□□ 1.31
SNRPA-201ENST00000243563 PARK7Q99497 189 aaKnown RBP23.26■■□□□ 1.31
SNRPA-201ENST00000243563 BARHL2Q9NY43 387 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 KCNJ14Q9UNX9 436 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 LCTP09848 1927 aa23.26■■□□□ 1.31
SNRPA-201ENST00000243563 ANKRD13CQ8N6S4 541 aa23.25■■□□□ 1.31
SNRPA-201ENST00000243563 FAM184AQ8NB25 1140 aa23.25■■□□□ 1.31
SNRPA-201ENST00000243563 AMNQ9BXJ7 453 aa23.25■■□□□ 1.31
SNRPA-201ENST00000243563 ZCCHC17Q9NP64 241 aaKnown RBP23.25■■□□□ 1.31
SNRPA-201ENST00000243563 CPA4Q9UI42 421 aa23.25■■□□□ 1.31
SNRPA-201ENST00000243563 CCPG1Q9ULG6 757 aa23.25■■□□□ 1.31
SNRPA-201ENST00000243563 DDIT3P35638 169 aa23.24■■□□□ 1.31
SNRPA-201ENST00000243563 MAP2K2P36507 400 aa23.24■■□□□ 1.31
SNRPA-201ENST00000243563 PKP1Q13835 747 aa23.24■■□□□ 1.31
SNRPA-201ENST00000243563 PLS1Q14651 629 aa23.24■■□□□ 1.31
SNRPA-201ENST00000243563 MUM1L1Q5H9M0 696 aa23.24■■□□□ 1.31
SNRPA-201ENST00000243563 SNRNP48Q6IEG0 339 aaKnown RBP23.24■■□□□ 1.31
SNRPA-201ENST00000243563 RBM27Q9P2N5 1060 aaKnown RBP23.24■■□□□ 1.31
SNRPA-201ENST00000243563 PCDHA1Q9Y5I3 950 aa23.24■■□□□ 1.31
SNRPA-201ENST00000243563 ATP2A1O14983 1001 aa23.23■■□□□ 1.31
SNRPA-201ENST00000243563 NPY5RQ15761 445 aa23.23■■□□□ 1.31
SNRPA-201ENST00000243563 HOMER2Q9NSB8 354 aa23.23■■□□□ 1.31
SNRPA-201ENST00000243563 RABGAP1Q9Y3P9 1069 aa23.23■■□□□ 1.31
SNRPA-201ENST00000243563 PLXNB2O15031 1838 aa23.23■■□□□ 1.31
SNRPA-201ENST00000243563 FDX1P10109 184 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 ALAS1P13196 640 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 MB21D1Q8N884 522 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 CLEC4DQ8WXI8 215 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 TBC1D5Q92609 795 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 MOV10L1Q9BXT6 1211 aaKnown RBP23.22■■□□□ 1.31
SNRPA-201ENST00000243563 SPATC1LQ9H0A9 340 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 CTDP1Q9Y5B0 961 aaPredicted RBP23.22■■□□□ 1.31
SNRPA-201ENST00000243563 MGAMO43451 1857 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 CEP350Q5VT06 3117 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 BCRP11274 1271 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 SYT1P21579 422 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 STAT3P40763 770 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 NAPAP54920 295 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 ERVK-9P63128 1117 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 ERVK-24P63145 666 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 KRT40Q6A162 431 aa23.22■■□□□ 1.31
SNRPA-201ENST00000243563 DNAJC5GQ8N7S2 189 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms