RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 FUCA2Q9BTY2 467 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 SH2D4AQ9H788 454 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 ADARB2Q9NS39 739 aaKnown RBP17.4■□□□□ 0.38
HDHD3-201ENST00000238379 HPSEQ9Y251 543 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 PPP2R3BQ9Y5P8 575 aa17.4■□□□□ 0.38
HDHD3-201ENST00000238379 XRCC6P12956 609 aaKnown RBP eCLIP17.39■□□□□ 0.37
HDHD3-201ENST00000238379 PFKFB1P16118 471 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 LMOD1P29536 600 aaPredicted RBP17.39■□□□□ 0.37
HDHD3-201ENST00000238379 GRIN1Q05586 938 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 CDC37Q16543 378 aaPredicted RBP17.39■□□□□ 0.37
HDHD3-201ENST00000238379 MAP3K11Q16584 847 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 DCAF15Q66K64 600 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 KRT25Q7Z3Z0 450 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 HOOK2Q96ED9 719 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 RBSNQ9H1K0 784 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 ZNF112Q9UJU3 913 aa17.39■□□□□ 0.37
HDHD3-201ENST00000238379 KINO60870 393 aaKnown RBP17.38■□□□□ 0.37
HDHD3-201ENST00000238379 INPP5BP32019 993 aa17.38■□□□□ 0.37
HDHD3-201ENST00000238379 ADCY7P51828 1080 aa17.38■□□□□ 0.37
HDHD3-201ENST00000238379 REXO1Q8N1G1 1221 aaKnown RBP17.38■□□□□ 0.37
HDHD3-201ENST00000238379 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
HDHD3-201ENST00000238379 ZNF341Q9BYN7 854 aa17.38■□□□□ 0.37
HDHD3-201ENST00000238379 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
HDHD3-201ENST00000238379 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
HDHD3-201ENST00000238379 PITPNM2Q9BZ72 1349 aa17.38■□□□□ 0.37
HDHD3-201ENST00000238379 ATP2C1P98194 919 aaPredicted RBP17.37■□□□□ 0.37
HDHD3-201ENST00000238379 PTGDRQ13258 359 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 INF2Q27J81 1249 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 FAM83BQ5T0W9 1011 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 RIC8AQ9NPQ8 531 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 MCM7P33993 719 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 STAT2P52630 851 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 IKQ13123 557 aaPredicted RBP17.37■□□□□ 0.37
HDHD3-201ENST00000238379 NONOQ15233 471 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDHD3-201ENST00000238379 ZYXQ15942 572 aaKnown RBP17.37■□□□□ 0.37
HDHD3-201ENST00000238379 CKAP2LQ8IYA6 745 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 BIN2Q9UBW5 565 aaPredicted RBP17.37■□□□□ 0.37
HDHD3-201ENST00000238379 PRR12Q9ULL5 1215 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 PCDHA1Q9Y5I3 950 aa17.37■□□□□ 0.37
HDHD3-201ENST00000238379 CTAGE5O15320 804 aa17.36■□□□□ 0.37
HDHD3-201ENST00000238379 ZNF202O95125 648 aa17.36■□□□□ 0.37
HDHD3-201ENST00000238379 C4orf32Q8N8J7 132 aa17.36■□□□□ 0.37
HDHD3-201ENST00000238379 FERMT2Q96AC1 680 aa17.36■□□□□ 0.37
HDHD3-201ENST00000238379 TMEM260Q9NX78 707 aa17.36■□□□□ 0.37
HDHD3-201ENST00000238379 PLA2G6O60733 806 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
HDHD3-201ENST00000238379 SNAP25P60880 206 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 JAKMIP3Q5VZ66 844 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 DPY19L2Q6NUT2 758 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 L3MBTL3Q96JM7 780 aaPredicted RBP17.35■□□□□ 0.37
HDHD3-201ENST00000238379 FEZ1Q99689 392 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 AMNQ9BXJ7 453 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 CSRNP2Q9H175 543 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 SSC5DA1L4H1 1573 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 SYKP43405 635 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
HDHD3-201ENST00000238379 GPR162Q16538 588 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 SPECC1Q5M775 1068 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 SCYL3Q8IZE3 742 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 CUL5Q93034 780 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
HDHD3-201ENST00000238379 POLR2AP24928 1970 aaKnown RBP17.34■□□□□ 0.37
HDHD3-201ENST00000238379 SUPT20HL1Q3ZLR7 823 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 FBXO11Q86XK2 927 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 TBCKQ8TEA7 893 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 CHURC1Q8WUH1 139 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 ZKSCAN4Q969J2 545 aaPredicted RBP17.34■□□□□ 0.37
HDHD3-201ENST00000238379 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 TIGD1Q96MW7 591 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 WRNIP1Q96S55 665 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 KCNH3Q9ULD8 1083 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 FZD1Q9UP38 647 aa17.34■□□□□ 0.37
HDHD3-201ENST00000238379 CCDC192P0DO97 292 aa17.33■□□□□ 0.37
HDHD3-201ENST00000238379 ARL6IP4Q66PJ3 421 aaKnown RBP17.33■□□□□ 0.37
HDHD3-201ENST00000238379 NEK8Q86SG6 692 aa17.33■□□□□ 0.37
HDHD3-201ENST00000238379 FAM160B2Q86V87 743 aa17.33■□□□□ 0.37
HDHD3-201ENST00000238379 LPAR1Q92633 364 aa17.33■□□□□ 0.37
HDHD3-201ENST00000238379 SDF4Q9BRK5 362 aa17.33■□□□□ 0.37
HDHD3-201ENST00000238379 TYRO3Q06418 890 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 IL17AQ16552 155 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 UBE2SQ16763 222 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 USP49Q70CQ1 688 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 DCPSQ96C86 337 aaKnown RBP17.33■□□□□ 0.36
HDHD3-201ENST00000238379 WDR18Q9BV38 432 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 FEM1BQ9UK73 627 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 DOCK1Q14185 1865 aa17.33■□□□□ 0.36
HDHD3-201ENST00000238379 EDIL3O43854 480 aa17.32■□□□□ 0.36
HDHD3-201ENST00000238379 TMEM60Q9H2L4 133 aa17.32■□□□□ 0.36
HDHD3-201ENST00000238379 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
HDHD3-201ENST00000238379 FBXO28Q9NVF7 368 aa17.32■□□□□ 0.36
HDHD3-201ENST00000238379 ZC3H4Q9UPT8 1303 aaKnown RBP17.32■□□□□ 0.36
HDHD3-201ENST00000238379 VWA3AA6NCI4 1184 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 WDR46O15213 610 aaKnown RBP17.31■□□□□ 0.36
HDHD3-201ENST00000238379 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 PTPRAP18433 802 aa17.31■□□□□ 0.36
HDHD3-201ENST00000238379 LETM2Q2VYF4 491 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms