RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 POTEAQ6S8J7 498 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 SYT10Q6XYQ8 523 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 CERS5Q8N5B7 392 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 SEC63Q9UGP8 760 aaKnown RBP18.26■□□□□ 0.51
UBE3D-201ENST00000237186 ZNF215Q9UL58 517 aaPredicted RBP18.26■□□□□ 0.51
UBE3D-201ENST00000237186 ITIH6Q6UXX5 1313 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 C10orf71Q711Q0 1435 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 USP17L5A8MUK1 530 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 AKR1B15C9JRZ8 316 aaPredicted RBP18.26■□□□□ 0.51
UBE3D-201ENST00000237186 ASPRV1Q53RT3 343 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 NAA15Q9BXJ9 866 aaKnown RBP18.26■□□□□ 0.51
UBE3D-201ENST00000237186 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 PPP2R2CQ9Y2T4 447 aa18.26■□□□□ 0.51
UBE3D-201ENST00000237186 ADKP55263 362 aaKnown RBP18.25■□□□□ 0.51
UBE3D-201ENST00000237186 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
UBE3D-201ENST00000237186 HHIPL2Q6UWX4 724 aa18.25■□□□□ 0.51
UBE3D-201ENST00000237186 RASGRP2Q7LDG7 609 aa18.25■□□□□ 0.51
UBE3D-201ENST00000237186 NEK8Q86SG6 692 aa18.25■□□□□ 0.51
UBE3D-201ENST00000237186 PIGSQ96S52 555 aa18.25■□□□□ 0.51
UBE3D-201ENST00000237186 CTNND2Q9UQB3 1225 aa18.25■□□□□ 0.51
UBE3D-201ENST00000237186 RIMBP2O15034 1052 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 OR52Z1P0C646 297 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 GLIPR1L2Q4G1C9 344 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 HOMER1Q86YM7 354 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 ADSSL1Q8N142 457 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 CDK5RAP2Q96SN8 1893 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 H7C1D1 291 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 KLRC4O43908 158 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 RHOBTB3O94955 611 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 FECHP22830 423 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 IGSF22Q8N9C0 903 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 NELFBQ8WX92 580 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 CCDC51Q96ER9 411 aa18.24■□□□□ 0.51
UBE3D-201ENST00000237186 DDX4Q9NQI0 724 aaKnown RBP18.24■□□□□ 0.51
UBE3D-201ENST00000237186 TTF2Q9UNY4 1162 aaKnown RBP18.24■□□□□ 0.51
UBE3D-201ENST00000237186 PP2D1A8MPX8 630 aa18.23■□□□□ 0.51
UBE3D-201ENST00000237186 PDE6BP35913 854 aa18.23■□□□□ 0.51
UBE3D-201ENST00000237186 PRCPP42785 496 aa18.23■□□□□ 0.51
UBE3D-201ENST00000237186 KRT31Q15323 416 aa18.23■□□□□ 0.51
UBE3D-201ENST00000237186 PPFIBP1Q86W92 1011 aa18.23■□□□□ 0.51
UBE3D-201ENST00000237186 MRIQ9BWK5 157 aa18.23■□□□□ 0.51
UBE3D-201ENST00000237186 CGNQ9P2M7 1197 aaKnown RBP18.23■□□□□ 0.51
UBE3D-201ENST00000237186 SERPINB13Q9UIV8 391 aa18.23■□□□□ 0.51
UBE3D-201ENST00000237186 TNS1Q9HBL0 1735 aaKnown RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 CCNT1O60563 726 aaKnown RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 TTLL1O95922 423 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 AKR1B1P15121 316 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 RBL2Q08999 1139 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 PICALMQ13492 652 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 REXO1Q8N1G1 1221 aaKnown RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 GIMAP8Q8ND71 665 aaPredicted RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 GTPBP4Q9BZE4 634 aaKnown RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 COPB1P53618 953 aaKnown RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 NAA30Q147X3 362 aaPredicted RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 LETM2Q2VYF4 491 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 TCP11X2Q5H9J9 407 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 APOBEC3HQ6NTF7 200 aaKnown RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 PPP1R18Q6NYC8 613 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 DPP8Q6V1X1 898 aaPredicted RBP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 CABP7Q86V35 215 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 ANKRD20A12PQ8NF67 263 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 TBCKQ8TEA7 893 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 UBA5Q9GZZ9 404 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 VAT1LQ9HCJ6 419 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 USP40Q9NVE5 1235 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 GDAQ9Y2T3 454 aa18.22■□□□□ 0.51
UBE3D-201ENST00000237186 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.22■□□□□ 0.51
UBE3D-201ENST00000237186 MFAP3LO75121 409 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 KMT5BQ4FZB7 885 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 CNGA4Q8IV77 575 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 LRRC15Q8TF66 581 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 C7orf25Q9BPX7 421 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 SRRTQ9BXP5 876 aaKnown RBP18.21■□□□□ 0.51
UBE3D-201ENST00000237186 EHD4Q9H223 541 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 DNAI1Q9UI46 699 aa18.21■□□□□ 0.51
UBE3D-201ENST00000237186 QSER1Q2KHR3 1735 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 SHMT1P34896 483 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 CDC42EP5Q6NZY7 148 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 TOGARAM2Q6ZUX3 1019 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 PODNQ7Z5L7 613 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 MASTLQ96GX5 879 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 MTMR9Q96QG7 549 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 PNMA6FA0A0J9YX94 578 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 N4BP3O15049 544 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 FANCGO15287 622 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 PLCG1P19174 1290 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 ZNF543Q08ER8 600 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 IRF2BP1Q8IU81 584 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 RASSF8Q8NHQ8 419 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 TEKT1Q969V4 418 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 FEZ1Q99689 392 aa18.2■□□□□ 0.5
UBE3D-201ENST00000237186 BIN2Q9UBW5 565 aaPredicted RBP18.2■□□□□ 0.5
UBE3D-201ENST00000237186 MYH1P12882 1939 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 FOCADQ5VW36 1801 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 KCNJ18B7U540 433 aa18.19■□□□□ 0.5
UBE3D-201ENST00000237186 F8W031 263 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms