RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 RMND1Q9NWS8 449 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 RAB21Q9UL25 225 aa17.51■□□□□ 0.39
CTSD-201ENST00000236671 MAP2K7O14733 419 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 MECOMQ03112 1051 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 ARL6IP4Q66PJ3 421 aaKnown RBP17.5■□□□□ 0.39
CTSD-201ENST00000236671 GDAQ9Y2T3 454 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 MYH8P13535 1937 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 KIF13BQ9NQT8 1826 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 POTEB2H3BUK9 544 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
CTSD-201ENST00000236671 CYP2D6P10635 497 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 LONP1P36776 959 aaKnown RBP17.5■□□□□ 0.39
CTSD-201ENST00000236671 USP5P45974 858 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 ST5P78524 1137 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 FBXO33Q7Z6M2 555 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 ANKRD20A12PQ8NF67 263 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 PNKPQ96T60 521 aa17.5■□□□□ 0.39
CTSD-201ENST00000236671 NUP88Q99567 741 aaPredicted RBP17.5■□□□□ 0.39
CTSD-201ENST00000236671 NAPGQ99747 312 aaPredicted RBP17.5■□□□□ 0.39
CTSD-201ENST00000236671 FAM205AQ6ZU69 1335 aa17.49■□□□□ 0.39
CTSD-201ENST00000236671 BAZ2BQ9UIF8 2168 aaKnown RBP17.49■□□□□ 0.39
CTSD-201ENST00000236671 KLRK1P26718 216 aa17.49■□□□□ 0.39
CTSD-201ENST00000236671 RCSD1Q6JBY9 416 aa17.49■□□□□ 0.39
CTSD-201ENST00000236671 CRNKL1Q9BZJ0 848 aaKnown RBP17.49■□□□□ 0.39
CTSD-201ENST00000236671 CALCOCO1Q9P1Z2 691 aa17.49■□□□□ 0.39
CTSD-201ENST00000236671 MYO1AQ9UBC5 1043 aa17.49■□□□□ 0.39
CTSD-201ENST00000236671 C10orf71Q711Q0 1435 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 PRCPP42785 496 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 BEND6Q5SZJ8 279 aaPredicted RBP17.48■□□□□ 0.39
CTSD-201ENST00000236671 IRF2BP1Q8IU81 584 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 CELF1Q92879 486 aaKnown RBP17.48■□□□□ 0.39
CTSD-201ENST00000236671 H3BQF6 201 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 CALML3P27482 149 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 KRT9P35527 623 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 BLIDQ8IZY5 108 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 ATP8A2Q9NTI2 1148 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 ARPP21Q9UBL0 812 aaPredicted RBP17.48■□□□□ 0.39
CTSD-201ENST00000236671 MAPK8IP1Q9UQF2 711 aa17.48■□□□□ 0.39
CTSD-201ENST00000236671 PDS5AQ29RF7 1337 aaKnown RBP17.48■□□□□ 0.39
CTSD-201ENST00000236671 MAST2Q6P0Q8 1798 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 STAT6P42226 847 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 TUBB4BP68371 445 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 AMPD2Q01433 879 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 WHAMMP3Q1A5X7 153 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 SBK1Q52WX2 424 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 NAALADL2Q58DX5 795 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 ADSSL1Q8N142 457 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 NEK11Q8NG66 645 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 SLF1Q9BQI6 1058 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 NYXQ9GZU5 481 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 DISC1Q9NRI5 854 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 REXO2Q9Y3B8 237 aaKnown RBP17.47■□□□□ 0.39
CTSD-201ENST00000236671 KIF5BP33176 963 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 UBXN1Q04323 297 aa17.47■□□□□ 0.39
CTSD-201ENST00000236671 GPKOWQ92917 476 aaPredicted RBP eCLIP17.47■□□□□ 0.39
CTSD-201ENST00000236671 TRIM49BA6NDI0 452 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 TSPY2A6NKD2 308 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 H7C1D1 291 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 RGL2O15211 777 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
CTSD-201ENST00000236671 DPEP1P16444 411 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 HNRNPH2P55795 449 aaKnown RBP17.46■□□□□ 0.39
CTSD-201ENST00000236671 WWC2Q6AWC2 1192 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 TXLNBQ8N3L3 684 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 CHP1Q99653 195 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 SH3GLB2Q9NR46 395 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 PCDHA4Q9UN74 947 aa17.46■□□□□ 0.39
CTSD-201ENST00000236671 M0R2N6 131 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 PRDX5P30044 214 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 PMS1P54277 932 aaKnown RBP17.45■□□□□ 0.38
CTSD-201ENST00000236671 TYW1BQ6NUM6 668 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 RASGRP4Q8TDF6 673 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 SYT17Q9BSW7 474 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 TTC26A0AVF1 554 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 CTAGE15A4D2H0 777 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 LGALS16A8MUM7 142 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 NDUFA10O95299 355 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 CTAGE8P0CG41 777 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 KCNA3P22001 575 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 CTAGE6Q86UF2 777 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 CTAGE4Q8IX94 777 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 MB21D1Q8N884 522 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 ABCB6Q9NP58 842 aa17.45■□□□□ 0.38
CTSD-201ENST00000236671 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
CTSD-201ENST00000236671 EPN1Q9Y6I3 576 aaPredicted RBP17.45■□□□□ 0.38
CTSD-201ENST00000236671 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
CTSD-201ENST00000236671 A0A1W2PQC6 194 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 KCNB1Q14721 858 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 HDXQ7Z353 690 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 MSL3Q8N5Y2 521 aaKnown RBP17.44■□□□□ 0.38
CTSD-201ENST00000236671 ZNF507Q8TCN5 953 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 DNAJC7Q99615 494 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 L1RE1Q9UN81 338 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 PP2D1A8MPX8 630 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 KLRC4O43908 158 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 ERLIN1O75477 346 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 RHOXF2BP0C7M4 288 aa17.44■□□□□ 0.38
CTSD-201ENST00000236671 EEF1GP26641 437 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms