RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 NAALADL2Q58DX5 795 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 SLC44A5Q8NCS7 719 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 RRP36Q96EU6 259 aaKnown RBP24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 WDR24Q96S15 920 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 MRFAP1Q9Y605 127 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 GAKO14976 1311 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 SPATA31A6Q5VVP1 1343 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 SOWAHDA6NJG2 315 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 GYPCP04921 128 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 CASP14P31944 242 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 PRCPP42785 496 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 GABPB1Q06547 395 aaPredicted RBP24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 BMS1Q14692 1282 aaKnown RBP24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 NONOQ15233 471 aaKnown RBP eCLIP24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 RAD9BQ6WBX8 426 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 LRRN4CLQ8ND94 238 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 CCDC47Q96A33 483 aaKnown RBP24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 CARD6Q9BX69 1037 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 TMEM60Q9H2L4 133 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 MYH1P12882 1939 aa24.76■■□□□ 1.55
SMARCD2-201ENST00000225742 ESYT2A0FGR8 921 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 RHOBTB3O94955 611 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 EEF1GP26641 437 aaKnown RBP24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 PPP1R2P41236 205 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 NAPAP54920 295 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 RASSF8Q8NHQ8 419 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 THAP9Q9H5L6 903 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 TTF2Q9UNY4 1162 aaKnown RBP24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 FLT1P17948 1338 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 FOCADQ5VW36 1801 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 HOXA10P31260 410 aaPredicted RBP24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 TMC4Q7Z404 712 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 DESI2Q9BSY9 194 aa24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 MRPL44Q9H9J2 332 aaKnown RBP24.75■■□□□ 1.55
SMARCD2-201ENST00000225742 KLRC4O43908 158 aa24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 OR52Z1P0C646 297 aa24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 SOGA3Q5TF21 947 aa24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 GIMAP8Q8ND71 665 aaPredicted RBP24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 CPLX3Q8WVH0 158 aa24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 DHTKD1Q96HY7 919 aaPredicted RBP24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 SEC63Q9UGP8 760 aaKnown RBP24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 GDAQ9Y2T3 454 aa24.74■■□□□ 1.55
SMARCD2-201ENST00000225742 PLIN4Q96Q06 1357 aa24.73■■□□□ 1.55
SMARCD2-201ENST00000225742 UBR3Q6ZT12 1888 aa24.73■■□□□ 1.55
SMARCD2-201ENST00000225742 KIF5CO60282 957 aa24.73■■□□□ 1.55
SMARCD2-201ENST00000225742 CCT6AP40227 531 aaKnown RBP24.73■■□□□ 1.55
SMARCD2-201ENST00000225742 RHBDL3P58872 404 aa24.73■■□□□ 1.55
SMARCD2-201ENST00000225742 MTF1Q14872 753 aa24.73■■□□□ 1.55
SMARCD2-201ENST00000225742 CYP26C1Q6V0L0 522 aa24.73■■□□□ 1.55
SMARCD2-201ENST00000225742 A0A1W2PQC6 194 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 SMCO2A6NFE2 343 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 PSMA7O14818 248 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 FXR1P51114 621 aaKnown RBP eCLIP24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 CRAMP1Q96RY5 1269 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 TAB2Q9NYJ8 693 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 ATP8B1O43520 1251 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 SERPINB2P05120 415 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 CDC25AP30304 524 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 CLCN6P51797 869 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 TUBB4BP68371 445 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 PPP2R3AQ06190 1150 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 NEK8Q86SG6 692 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 CABP7Q86V35 215 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 GPR161Q8N6U8 529 aaKnown RBP24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 GPR101Q96P66 508 aaPredicted RBP24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 VPS16Q9H269 839 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 ABHD10Q9NUJ1 306 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 SUGT1Q9Y2Z0 365 aa24.72■■□□□ 1.55
SMARCD2-201ENST00000225742 MFSD14BQ5SR56 506 aa24.71■■□□□ 1.55
SMARCD2-201ENST00000225742 C7orf25Q9BPX7 421 aa24.71■■□□□ 1.55
SMARCD2-201ENST00000225742 ZNF446Q9NWS9 450 aa24.71■■□□□ 1.55
SMARCD2-201ENST00000225742 MYO1AQ9UBC5 1043 aa24.71■■□□□ 1.55
SMARCD2-201ENST00000225742 LRRC37AA6NMS7 1700 aa24.71■■□□□ 1.55
SMARCD2-201ENST00000225742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.7■■□□□ 1.55
SMARCD2-201ENST00000225742 GOLGA8HP0CJ92 632 aa24.7■■□□□ 1.55
SMARCD2-201ENST00000225742 GYS1P13807 737 aa24.7■■□□□ 1.55
SMARCD2-201ENST00000225742 HOXA7P31268 230 aaPredicted RBP24.7■■□□□ 1.55
SMARCD2-201ENST00000225742 RSRC2Q7L4I2 434 aaKnown RBP24.7■■□□□ 1.55
SMARCD2-201ENST00000225742 RIOX1Q9H6W3 641 aa24.7■■□□□ 1.55
SMARCD2-201ENST00000225742 PRDM10Q9NQV6 1147 aa24.7■■□□□ 1.55
SMARCD2-201ENST00000225742 LGALS16A8MUM7 142 aa24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 AMPD3Q01432 767 aa24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 IRF2BP1Q8IU81 584 aa24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 TBC1D16Q8TBP0 767 aa24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 RABGGTAQ92696 567 aa24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 GJD4Q96KN9 370 aaPredicted RBP24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 NUP88Q99567 741 aaPredicted RBP24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 MAGEC2Q9UBF1 373 aaPredicted RBP24.7■■□□□ 1.54
SMARCD2-201ENST00000225742 C10orf71Q711Q0 1435 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 BICDL2A1A5D9 508 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 PP2D1A8MPX8 630 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 UBAP1LF5GYI3 381 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 ONECUT3O60422 494 aaPredicted RBP24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 UBXN1Q04323 297 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 COBLL1Q53SF7 1204 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 FAM182BQ5T319 152 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 TMCO3Q6UWJ1 677 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 SLC51AQ86UW1 340 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 CEP95Q96GE4 821 aa24.69■■□□□ 1.54
SMARCD2-201ENST00000225742 FAM193AP78312 1265 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms