RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 PDCP20941 246 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 SYT1P21579 422 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 HOMER1Q86YM7 354 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 FBXO18Q8NFZ0 1043 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 BARHL2Q9NY43 387 aa16.22■□□□□ 0.19
SEC61B-201ENST00000223641 SEC63Q9UGP8 760 aaKnown RBP16.22■□□□□ 0.19
SEC61B-201ENST00000223641 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 TM4SF4P48230 202 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 OAZ1P54368 228 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 LARP1BQ659C4 914 aaKnown RBP16.21■□□□□ 0.19
SEC61B-201ENST00000223641 WWC2Q6AWC2 1192 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 CYP4F22Q6NT55 531 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 FAM43AQ8N2R8 423 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 PIBF1Q8WXW3 757 aa16.21■□□□□ 0.19
SEC61B-201ENST00000223641 P2RX7Q99572 595 aaKnown RBP16.21■□□□□ 0.19
SEC61B-201ENST00000223641 STXBP3O00186 592 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 PDHXO00330 501 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 ZBED4O75132 1171 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 ICAM1P05362 532 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 OSBPP22059 807 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 SNAP25P60880 206 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 HERVK_113P62684 666 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
SEC61B-201ENST00000223641 NOGQ13253 232 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 FBXO11Q86XK2 927 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 MB21D1Q8N884 522 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 C8orf76Q96K31 380 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 GJB4Q9NTQ9 266 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 PNMA3Q9UL41 463 aa16.2■□□□□ 0.18
SEC61B-201ENST00000223641 ZNF214Q9UL59 606 aaPredicted RBP16.2■□□□□ 0.18
SEC61B-201ENST00000223641 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
SEC61B-201ENST00000223641 ESYT2A0FGR8 921 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 IGF2BP3O00425 579 aaKnown RBP eCLIP16.19■□□□□ 0.183e-6■■■□□ 18.9
SEC61B-201ENST00000223641 STX6O43752 255 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 XBP1P17861 261 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 SREBF2Q12772 1141 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 TRAF1Q13077 416 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 NPY5RQ15761 445 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 PPP1R18Q6NYC8 613 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 GPKOWQ92917 476 aaPredicted RBP eCLIP16.19■□□□□ 0.18
SEC61B-201ENST00000223641 COA7Q96BR5 231 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 CAPNS2Q96L46 248 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 ZIC5Q96T25 663 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 PHF20Q9BVI0 1012 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 ZMYND12Q9H0C1 365 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 VPS54Q9P1Q0 977 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 PNMA2Q9UL42 364 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 MTMR6Q9Y217 621 aa16.19■□□□□ 0.18
SEC61B-201ENST00000223641 KIF23Q02241 960 aaPredicted RBP16.18■□□□□ 0.18
SEC61B-201ENST00000223641 PKP1Q13835 747 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 TMEM132BQ14DG7 1078 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 KRT40Q6A162 431 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 HEATR3Q7Z4Q2 680 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
SEC61B-201ENST00000223641 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
SEC61B-201ENST00000223641 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 THSD7BQ9C0I4 1608 aa16.18■□□□□ 0.18
SEC61B-201ENST00000223641 CNMDO75829 334 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 BRD1O95696 1058 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 MMP1P03956 469 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 OTUD7BQ6GQQ9 843 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 TEX2Q8IWB9 1127 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 CCDC12Q8WUD4 166 aaPredicted RBP16.17■□□□□ 0.18
SEC61B-201ENST00000223641 AGBL1Q96MI9 1066 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 BTBD7Q9P203 1132 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 RBPJLQ9UBG7 517 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 RABGAP1Q9Y3P9 1069 aa16.17■□□□□ 0.18
SEC61B-201ENST00000223641 M0R2N6 131 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 OPLAHO14841 1288 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 CYP2C8P10632 490 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 NAPAP54920 295 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 NUCB2P80303 420 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 TRIM29Q14134 588 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 SAMD1Q6SPF0 538 aaPredicted RBP16.16■□□□□ 0.18
SEC61B-201ENST00000223641 DAGLBQ8NCG7 672 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 TEX13BQ9BXU2 312 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
SEC61B-201ENST00000223641 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 KCNJ14Q9UNX9 436 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 ABCB11O95342 1321 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 ADGRA2Q96PE1 1338 aa16.16■□□□□ 0.18
SEC61B-201ENST00000223641 WDR33Q9C0J8 1336 aaKnown RBP16.16■□□□□ 0.18
SEC61B-201ENST00000223641 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 H3BQV1 296 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 CALML3P27482 149 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 MAP2K2P36507 400 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 STAT3P40763 770 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 GCLCP48506 637 aaPredicted RBP16.15■□□□□ 0.18
SEC61B-201ENST00000223641 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 GUCY1B3Q02153 619 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms