RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SLC35G1Q2M3R5 365 aa27.47■■□□□ 1.99
HOMER3-201ENST00000221222 RIOX1Q9H6W3 641 aa27.47■■□□□ 1.99
HOMER3-201ENST00000221222 EFCC1Q9HA90 598 aa27.47■■□□□ 1.99
HOMER3-201ENST00000221222 CTDP1Q9Y5B0 961 aaPredicted RBP27.47■■□□□ 1.99
HOMER3-201ENST00000221222 MYH6P13533 1939 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 TMTC3Q6ZXV5 915 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 NBPF11Q86T75 865 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 MTMR8Q96EF0 704 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 SPZ1Q9BXG8 430 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 TEX13BQ9BXU2 312 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 JMJD4Q9H9V9 463 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 FAM217BQ9NTX9 383 aaPredicted RBP27.46■■□□□ 1.99
HOMER3-201ENST00000221222 ZNF536O15090 1300 aa27.46■■□□□ 1.99
HOMER3-201ENST00000221222 ZSWIM8A7E2V4 1837 aa27.45■■□□□ 1.99
HOMER3-201ENST00000221222 BAZ2BQ9UIF8 2168 aaKnown RBP27.45■■□□□ 1.98
HOMER3-201ENST00000221222 CYTH3O43739 400 aa27.45■■□□□ 1.98
HOMER3-201ENST00000221222 STAT3P40763 770 aa27.45■■□□□ 1.98
HOMER3-201ENST00000221222 SHCBP1Q8NEM2 672 aa27.45■■□□□ 1.98
HOMER3-201ENST00000221222 LARP6Q9BRS8 491 aaKnown RBP27.45■■□□□ 1.98
HOMER3-201ENST00000221222 MOV10L1Q9BXT6 1211 aaKnown RBP27.45■■□□□ 1.98
HOMER3-201ENST00000221222 TPCN1Q9ULQ1 816 aa27.45■■□□□ 1.98
HOMER3-201ENST00000221222 CCDC196A0A1B0GTZ2 297 aa27.44■■□□□ 1.98
HOMER3-201ENST00000221222 PLEKHA8P1O95397 391 aa27.44■■□□□ 1.98
HOMER3-201ENST00000221222 CDC27P30260 824 aa27.44■■□□□ 1.98
HOMER3-201ENST00000221222 SNAP25P60880 206 aa27.44■■□□□ 1.98
HOMER3-201ENST00000221222 PLS1Q14651 629 aa27.44■■□□□ 1.98
HOMER3-201ENST00000221222 RIOX2Q8IUF8 465 aa27.44■■□□□ 1.98
HOMER3-201ENST00000221222 SRBD1Q8N5C6 995 aaKnown RBP27.44■■□□□ 1.98
HOMER3-201ENST00000221222 RAVER2Q9HCJ3 691 aaKnown RBP27.44■■□□□ 1.98
HOMER3-201ENST00000221222 PTPN22Q9Y2R2 807 aa27.44■■□□□ 1.98
HOMER3-201ENST00000221222 DHX16O60231 1041 aaKnown RBP27.43■■□□□ 1.98
HOMER3-201ENST00000221222 SLC25A27O95847 323 aa27.43■■□□□ 1.98
HOMER3-201ENST00000221222 ICAM1P05362 532 aa27.43■■□□□ 1.98
HOMER3-201ENST00000221222 KIF22Q14807 665 aa27.43■■□□□ 1.98
HOMER3-201ENST00000221222 CDC37Q16543 378 aaPredicted RBP27.43■■□□□ 1.98
HOMER3-201ENST00000221222 CPXCR1Q8N123 301 aa27.43■■□□□ 1.98
HOMER3-201ENST00000221222 PORCNQ9H237 461 aa27.43■■□□□ 1.98
HOMER3-201ENST00000221222 HTTP42858 3142 aa27.42■■□□□ 1.98
HOMER3-201ENST00000221222 CTGFP29279 349 aa27.42■■□□□ 1.98
HOMER3-201ENST00000221222 MAPK4P31152 587 aa27.42■■□□□ 1.98
HOMER3-201ENST00000221222 COPB2P35606 906 aa27.42■■□□□ 1.98
HOMER3-201ENST00000221222 SNRNP48Q6IEG0 339 aaKnown RBP27.42■■□□□ 1.98
HOMER3-201ENST00000221222 VAT1LQ9HCJ6 419 aa27.42■■□□□ 1.98
HOMER3-201ENST00000221222 PNMA2Q9UL42 364 aa27.42■■□□□ 1.98
HOMER3-201ENST00000221222 SMCHD1A6NHR9 2005 aa27.41■■□□□ 1.98
HOMER3-201ENST00000221222 ECM2O94769 699 aaPredicted RBP27.41■■□□□ 1.98
HOMER3-201ENST00000221222 ADD1P35611 737 aaKnown RBP27.41■■□□□ 1.98
HOMER3-201ENST00000221222 CCDC174Q6PII3 467 aa27.41■■□□□ 1.98
HOMER3-201ENST00000221222 ST18O60284 1047 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 ERCC3P19447 782 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 PSMC4P43686 418 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 FCGRTP55899 365 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 CCT2P78371 535 aaKnown RBP27.4■■□□□ 1.98
HOMER3-201ENST00000221222 FUT2Q10981 343 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 QRICH1Q2TAL8 776 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 CMTR1Q8N1G2 835 aaKnown RBP27.4■■□□□ 1.98
HOMER3-201ENST00000221222 AGBL1Q96MI9 1066 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 ARHGAP39Q9C0H5 1083 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 MROH8Q9H579 483 aa27.4■■□□□ 1.98
HOMER3-201ENST00000221222 DOCK3Q8IZD9 2030 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 CNTNAP5Q8WYK1 1306 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 ZBTB5O15062 677 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 PFKFB2O60825 505 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 ARHGEF6Q15052 776 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 CCAR1Q8IX12 1150 aaKnown RBP27.39■■□□□ 1.98
HOMER3-201ENST00000221222 TRIM47Q96LD4 638 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 PIGSQ96S52 555 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 LIMCH1Q9UPQ0 1083 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 RIPK3Q9Y572 518 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 PLXNB2O15031 1838 aa27.39■■□□□ 1.98
HOMER3-201ENST00000221222 GNRH1P01148 92 aa27.38■■□□□ 1.97
HOMER3-201ENST00000221222 ME3Q16798 604 aa27.38■■□□□ 1.97
HOMER3-201ENST00000221222 TKFCQ3LXA3 575 aa27.38■■□□□ 1.97
HOMER3-201ENST00000221222 NOL8Q76FK4 1167 aaKnown RBP27.38■■□□□ 1.97
HOMER3-201ENST00000221222 SLKQ9H2G2 1235 aaPredicted RBP27.38■■□□□ 1.97
HOMER3-201ENST00000221222 NCOA5Q9HCD5 579 aaKnown RBP27.38■■□□□ 1.97
HOMER3-201ENST00000221222 CCPG1Q9ULG6 757 aa27.38■■□□□ 1.97
HOMER3-201ENST00000221222 KIAA0100Q14667 2235 aaKnown RBP27.38■■□□□ 1.97
HOMER3-201ENST00000221222 PNMA6FA0A0J9YX94 578 aa27.37■■□□□ 1.97
HOMER3-201ENST00000221222 STK3Q13188 491 aa27.37■■□□□ 1.97
HOMER3-201ENST00000221222 NTRK3Q16288 839 aa27.37■■□□□ 1.97
HOMER3-201ENST00000221222 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.37■■□□□ 1.97
HOMER3-201ENST00000221222 GPR142Q7Z601 462 aa27.37■■□□□ 1.97
HOMER3-201ENST00000221222 NCAPG2Q86XI2 1143 aa27.37■■□□□ 1.97
HOMER3-201ENST00000221222 CHST13Q8NET6 341 aa27.37■■□□□ 1.97
HOMER3-201ENST00000221222 RRP36Q96EU6 259 aaKnown RBP27.37■■□□□ 1.97
HOMER3-201ENST00000221222 ZNF236Q9UL36 1845 aa27.37■■□□□ 1.97
HOMER3-201ENST00000221222 POTEFA5A3E0 1075 aa27.36■■□□□ 1.97
HOMER3-201ENST00000221222 TNPO2O14787 897 aaKnown RBP27.36■■□□□ 1.97
HOMER3-201ENST00000221222 LARGE1O95461 756 aa27.36■■□□□ 1.97
HOMER3-201ENST00000221222 FMNL1O95466 1100 aaPredicted RBP27.36■■□□□ 1.97
HOMER3-201ENST00000221222 SCRN1Q12765 414 aa27.36■■□□□ 1.97
HOMER3-201ENST00000221222 PLEKHH3Q7Z736 793 aa27.36■■□□□ 1.97
HOMER3-201ENST00000221222 HOMER1Q86YM7 354 aa27.36■■□□□ 1.97
HOMER3-201ENST00000221222 CCDC82Q8N4S0 544 aa27.36■■□□□ 1.97
HOMER3-201ENST00000221222 PPP1R11O60927 126 aaPredicted RBP27.35■■□□□ 1.97
HOMER3-201ENST00000221222 IFNAR1P17181 557 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 FBXO11Q86XK2 927 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 ZSCAN31Q96LW9 406 aaPredicted RBP27.35■■□□□ 1.97
HOMER3-201ENST00000221222 AMNQ9BXJ7 453 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms