RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 KAT2BQ92831 832 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 PSMB7Q99436 277 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 GREM2Q9H772 168 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 ZC3H4Q9UPT8 1303 aaKnown RBP10.81□□□□□ -0.68
TUBB1-201ENST00000217133 TNS2Q63HR2 1409 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 TRIM37O94972 964 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 TBC1D8BQ0IIM8 1120 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.81□□□□□ -0.68
TUBB1-201ENST00000217133 MIGA1Q8NAN2 632 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 EEF2KMTQ96G04 330 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 CCDC42Q96M95 316 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 DNAJC7Q99615 494 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 CAPN11Q9UMQ6 739 aa10.81□□□□□ -0.68
TUBB1-201ENST00000217133 GSG1L2A8MUP6 293 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 PSMA7O14818 248 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 DNM2P50570 870 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 ATP1A2P50993 1020 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 SLC7A5Q01650 507 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 PPARAQ07869 468 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 SWT1Q5T5J6 900 aaKnown RBP10.8□□□□□ -0.68
TUBB1-201ENST00000217133 CATIPQ7Z7H3 387 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 RRP36Q96EU6 259 aaKnown RBP10.8□□□□□ -0.68
TUBB1-201ENST00000217133 NHEJ1Q9H9Q4 299 aaPredicted RBP10.8□□□□□ -0.68
TUBB1-201ENST00000217133 DUSP10Q9Y6W6 482 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 TNKSO95271 1327 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 RTL9Q8NET4 1388 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 B4DLN1 442 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 PAFAH1B1P43034 410 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 NLRP5P59047 1200 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 PDCLQ13371 301 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 EZH2Q15910 746 aaKnown RBP10.8□□□□□ -0.68
TUBB1-201ENST00000217133 PIK3AP1Q6ZUJ8 805 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 SPATA5Q8NB90 893 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 STAG1Q8WVM7 1258 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 ESR2Q92731 530 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 LRRC1Q9BTT6 524 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 TACC3Q9Y6A5 838 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 ARFGEF2Q9Y6D5 1785 aa10.8□□□□□ -0.68
TUBB1-201ENST00000217133 A0A1W2PQC6 194 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 WNT7AO00755 349 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 PDE8BO95263 885 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 EEF1GP26641 437 aaKnown RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 MTIF2P46199 727 aaKnown RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 RNF187Q5TA31 235 aaPredicted RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 KCTD16Q68DU8 428 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 WDR59Q6PJI9 974 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 ZBTB38Q8NAP3 1195 aaPredicted RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 DMGDHQ9UI17 866 aaKnown RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 UTRNP46939 3433 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 SIPA1L3O60292 1781 aaPredicted RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 TCRBV5S4A2TA0A5A2 114 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 LCORLQ8N3X6 602 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 TRIM58Q8NG06 486 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 ZNF512BQ96KM6 892 aaPredicted RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 PHF20Q9BVI0 1012 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 TSGA10Q9BZW7 698 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 AGPAT5Q9NUQ2 364 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 LRP2BPQ9P2M1 347 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 RCCD1A6NED2 376 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 A6NNZ2 444 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 CSF1RP07333 972 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 GNAT2P19087 354 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 RDXP35241 583 aaKnown RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 EPHB4P54760 987 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 ATP2C1P98194 919 aaPredicted RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 PPP2R5BQ15173 497 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 TUBB8Q3ZCM7 444 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 IFIT1BQ5T764 474 aaKnown RBP10.79□□□□□ -0.68
TUBB1-201ENST00000217133 MICALCLQ6ZW33 695 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 CCDC170Q8IYT3 715 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 HDAC7Q8WUI4 952 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 NUP58Q9BVL2 599 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 EXOC1Q9NV70 894 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 LRWD1Q9UFC0 647 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 MYH8P13535 1937 aa10.79□□□□□ -0.68
TUBB1-201ENST00000217133 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 RXRBP28702 533 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 VAV2P52735 878 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 KRT27Q7Z3Y8 459 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 CSGALNACT2Q8N6G5 542 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 SMCR8Q8TEV9 937 aaPredicted RBP10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ARL8AQ96BM9 186 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ALS2CR12Q96Q35 445 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 TUBGCP2Q9BSJ2 902 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ATRNO75882 1429 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 NRAPQ86VF7 1730 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 RCAN1P53805 252 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 CFAP58Q5T655 872 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
TUBB1-201ENST00000217133 C8orf74Q6P047 294 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 SPATA4Q8NEY3 305 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 CCDC47Q96A33 483 aaKnown RBP10.78□□□□□ -0.68
TUBB1-201ENST00000217133 CABS1Q96KC9 395 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 PLIN2Q99541 437 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 SNX12Q9UMY4 172 aa10.78□□□□□ -0.68
TUBB1-201ENST00000217133 BCL9O00512 1426 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms