RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PRPHP41219 470 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 NT5DC1Q5TFE4 455 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 CIAPIN1Q6FI81 312 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 KCTD1Q719H9 257 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 NEK8Q86SG6 692 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 DRC7Q8IY82 874 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 C4orf32Q8N8J7 132 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 IQUBQ8NA54 791 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 GMCL1P1Q8NEA9 526 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 SYNPO2Q9UMS6 1093 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 IKBKBO14920 756 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 CXCL9Q07325 125 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 TNIP1Q15025 636 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 TTBK2Q6IQ55 1244 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 PPP1R1BQ9UD71 204 aaPredicted RBP19.76■□□□□ 0.75
VRK1-201ENST00000216639 CDC25BP30305 580 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 ISM2Q6H9L7 571 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 COA7Q96BR5 231 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 MTMR8Q96EF0 704 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 GLT8D2Q9H1C3 349 aa19.76■□□□□ 0.75
VRK1-201ENST00000216639 FOXN1O15353 648 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 GH2P01242 217 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 SARSP49591 514 aaKnown RBP19.75■□□□□ 0.75
VRK1-201ENST00000216639 LETM2Q2VYF4 491 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 MRFAP1L1Q96HT8 127 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 GMCL1Q96IK5 515 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 VEZTQ9HBM0 779 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 RIC8AQ9NPQ8 531 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 BIN2Q9UBW5 565 aaPredicted RBP19.75■□□□□ 0.75
VRK1-201ENST00000216639 CD2APQ9Y5K6 639 aa19.75■□□□□ 0.75
VRK1-201ENST00000216639 USP17L10C9JJH3 530 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 F5H6K3 240 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 CCNT1O60563 726 aaKnown RBP19.74■□□□□ 0.75
VRK1-201ENST00000216639 SLC16A2P36021 539 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 MRPL12P52815 198 aaKnown RBP19.74■□□□□ 0.75
VRK1-201ENST00000216639 KLRC3Q07444 240 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 IL17AQ16552 155 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 JAKMIP3Q5VZ66 844 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 ILDR2Q71H61 639 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 FAM83AQ86UY5 434 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 MLKLQ8NB16 471 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 SPC24Q8NBT2 197 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 TBCKQ8TEA7 893 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 CUL5Q93034 780 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 MAN1B1Q9UKM7 699 aa19.74■□□□□ 0.75
VRK1-201ENST00000216639 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
VRK1-201ENST00000216639 A0A087X0B3 334 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 NEMFO60524 1076 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 PRR29P0C7W0 189 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 SIAH1Q8IUQ4 282 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 PAGE5Q96GU1 130 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 ARHGEF10LQ9HCE6 1279 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 OR52Z1P0C646 297 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 MYL5Q02045 173 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 SHROOM1Q2M3G4 852 aaPredicted RBP19.73■□□□□ 0.75
VRK1-201ENST00000216639 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 SH3RF1Q7Z6J0 888 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 SPATA20Q8TB22 786 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 AK8Q96MA6 479 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.73■□□□□ 0.75
VRK1-201ENST00000216639 CNTNAP1P78357 1384 aa19.73■□□□□ 0.75
VRK1-201ENST00000216639 ZNF500O60304 480 aaPredicted RBP19.72■□□□□ 0.75
VRK1-201ENST00000216639 TBC1D12O60347 775 aa19.72■□□□□ 0.75
VRK1-201ENST00000216639 RPS12P25398 132 aaKnown RBP19.72■□□□□ 0.75
VRK1-201ENST00000216639 TNNI2P48788 182 aa19.72■□□□□ 0.75
VRK1-201ENST00000216639 MORC3Q14149 939 aa19.72■□□□□ 0.75
VRK1-201ENST00000216639 R3HDM1Q15032 1099 aaKnown RBP19.72■□□□□ 0.75
VRK1-201ENST00000216639 TMEM60Q9H2L4 133 aa19.72■□□□□ 0.75
VRK1-201ENST00000216639 BRCA1P38398 1863 aaKnown RBP19.72■□□□□ 0.75
VRK1-201ENST00000216639 NDUFB10O96000 172 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 UBA7P41226 1012 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 AFMP43652 599 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 E2F4Q16254 413 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 CT47A1Q5JQC4 288 aaPredicted RBP19.71■□□□□ 0.75
VRK1-201ENST00000216639 GRAMD1CQ8IYS0 662 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 GSDMAQ96QA5 445 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 MYOZ2Q9NPC6 264 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 TMEM260Q9NX78 707 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 PPP1R11O60927 126 aaPredicted RBP19.71■□□□□ 0.75
VRK1-201ENST00000216639 BMP3P12645 472 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 CDC37Q16543 378 aaPredicted RBP19.71■□□□□ 0.75
VRK1-201ENST00000216639 QRICH1Q2TAL8 776 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 RASSF8Q8NHQ8 419 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 ZBED3Q96IU2 234 aaPredicted RBP19.71■□□□□ 0.75
VRK1-201ENST00000216639 CCSER1Q9C0I3 900 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 PSTPIP2Q9H939 334 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 BCS1LQ9Y276 419 aa19.71■□□□□ 0.75
VRK1-201ENST00000216639 LTBP3Q9NS15 1303 aa19.7■□□□□ 0.74
VRK1-201ENST00000216639 STAT6P42226 847 aa19.7■□□□□ 0.74
VRK1-201ENST00000216639 IKQ13123 557 aaPredicted RBP19.7■□□□□ 0.74
VRK1-201ENST00000216639 NCAPHQ15003 741 aa19.7■□□□□ 0.74
VRK1-201ENST00000216639 NAP1L4Q99733 375 aaKnown RBP19.7■□□□□ 0.74
VRK1-201ENST00000216639 ARFGEF1Q9Y6D6 1849 aa19.69■□□□□ 0.74
VRK1-201ENST00000216639 NFKBIEO00221 500 aa19.69■□□□□ 0.74
VRK1-201ENST00000216639 WNT10BO00744 389 aa19.69■□□□□ 0.74
VRK1-201ENST00000216639 DPYDQ12882 1025 aa19.69■□□□□ 0.74
VRK1-201ENST00000216639 RRP1BQ14684 758 aaKnown RBP19.69■□□□□ 0.74
VRK1-201ENST00000216639 MCTP2Q6DN12 878 aa19.69■□□□□ 0.74
VRK1-201ENST00000216639 GOPCQ9HD26 462 aa19.69■□□□□ 0.74
VRK1-201ENST00000216639 DISC1Q9NRI5 854 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms