RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 CDCP2Q5VXM1 449 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 ZC3H14Q6PJT7 736 aaKnown RBP5.07□□□□□ -1.6
CDKN3-201ENST00000216414 CRTC3Q6UUV7 619 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 SND1Q7KZF4 910 aaKnown RBP eCLIP5.07□□□□□ -1.6
CDKN3-201ENST00000216414 NLRC3Q7RTR2 1065 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 FRMD5Q7Z6J6 570 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 TP53I13Q8NBR0 393 aaPredicted RBP5.07□□□□□ -1.6
CDKN3-201ENST00000216414 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 JMJD8Q96S16 334 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 CNNM2Q9H8M5 875 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 ACSL6Q9UKU0 697 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 PALD1Q9ULE6 856 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 PCDHB12Q9Y5F1 795 aa5.07□□□□□ -1.6
CDKN3-201ENST00000216414 ROBO2Q9HCK4 1378 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 ZNF205O95201 554 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 ATE1O95260 518 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 BMP8BP34820 402 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 EIF4A3P38919 411 aaKnown RBP5.06□□□□□ -1.6
CDKN3-201ENST00000216414 CTSKP43235 329 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 KCNC1P48547 511 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 RTP5Q14D33 572 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 GK5Q6ZS86 529 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 AEBP1Q8IUX7 1158 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 NLGN1Q8N2Q7 840 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 NAT16Q8N8M0 369 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 EAF1Q96JC9 268 aaPredicted RBP5.06□□□□□ -1.6
CDKN3-201ENST00000216414 SLC6A18Q96N87 628 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 DSCC1Q9BVC3 393 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 LRRC3Q9BY71 257 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 COPRSQ9NQ92 184 aa5.06□□□□□ -1.6
CDKN3-201ENST00000216414 FFAR3O14843 346 aa5.05□□□□□ -1.6
CDKN3-201ENST00000216414 VAV1P15498 845 aa5.05□□□□□ -1.6
CDKN3-201ENST00000216414 CCNFP41002 786 aa5.05□□□□□ -1.6
CDKN3-201ENST00000216414 CBX2Q14781 532 aaPredicted RBP5.05□□□□□ -1.6
CDKN3-201ENST00000216414 NR1I3Q14994 352 aa5.05□□□□□ -1.6
CDKN3-201ENST00000216414 SEZ6Q53EL9 994 aa5.05□□□□□ -1.6
CDKN3-201ENST00000216414 TMEM192Q8IY95 271 aa5.05□□□□□ -1.6
CDKN3-201ENST00000216414 TRAIPQ9BWF2 469 aa5.05□□□□□ -1.6
CDKN3-201ENST00000216414 A0A1W2PQJ5 194 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 PRICKLE3O43900 615 aaPredicted RBP5.04□□□□□ -1.6
CDKN3-201ENST00000216414 MCM4P33991 863 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 CRKP46108 304 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 MAPKAPK2P49137 400 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 CEBPAP49715 358 aaPredicted RBP5.04□□□□□ -1.6
CDKN3-201ENST00000216414 SLURP1P55000 103 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 TAGLNQ01995 201 aaKnown RBP5.04□□□□□ -1.6
CDKN3-201ENST00000216414 CLCQ05315 142 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 FBXO33Q7Z6M2 555 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 LSRQ86X29 649 aaPredicted RBP5.04□□□□□ -1.6
CDKN3-201ENST00000216414 JAMLQ86YT9 394 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 TMEM52Q8NDY8 209 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 ANTXR1Q9H6X2 564 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 EHMT1Q9H9B1 1298 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 USP40Q9NVE5 1235 aa5.04□□□□□ -1.6
CDKN3-201ENST00000216414 FAM86C2PA6NEL3 165 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 GREM1O60565 184 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 GSNP06396 782 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 GSTM1P09488 218 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 MSL3P1P0C860 447 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 NME1P15531 152 aaKnown RBP5.03□□□□□ -1.6
CDKN3-201ENST00000216414 IGFBP6P24592 240 aaPredicted RBP5.03□□□□□ -1.6
CDKN3-201ENST00000216414 ITGAEP38570 1179 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 MVKQ03426 396 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 AUHQ13825 339 aaKnown RBP5.03□□□□□ -1.6
CDKN3-201ENST00000216414 RTP2Q5QGT7 225 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 CWF19L1Q69YN2 538 aaKnown RBP5.03□□□□□ -1.6
CDKN3-201ENST00000216414 ERMP1Q7Z2K6 904 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 ADGRG2Q8IZP9 1017 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 ZNF296Q8WUU4 475 aaPredicted RBP5.03□□□□□ -1.6
CDKN3-201ENST00000216414 UBP1Q9NZI7 540 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 SUSD2Q9UGT4 822 aa5.03□□□□□ -1.6
CDKN3-201ENST00000216414 IRS2Q9Y4H2 1338 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 A0A1B0GTL3 188 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 DBHP09172 617 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 TARBP2Q15633 366 aaKnown RBP5.02□□□□□ -1.61
CDKN3-201ENST00000216414 UBXN11Q5T124 520 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 NT5DC1Q5TFE4 455 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 HLA-DQA1Q5Y7H0 255 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 BICRALQ6AI39 1079 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 DNAJC14Q6Y2X3 702 aaPredicted RBP5.02□□□□□ -1.61
CDKN3-201ENST00000216414 SPATA25Q9BR10 227 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 KCNQ5Q9NR82 932 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 CNOT11Q9UKZ1 510 aaKnown RBP5.02□□□□□ -1.61
CDKN3-201ENST00000216414 FAN1Q9Y2M0 1017 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 HCFC2Q9Y5Z7 792 aa5.02□□□□□ -1.61
CDKN3-201ENST00000216414 K7ESM1 405 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 TNFRSF10CO14798 259 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 AKAP8O43823 692 aaKnown RBP5.01□□□□□ -1.61
CDKN3-201ENST00000216414 PLA2G1BP04054 148 aaKnown RBP5.01□□□□□ -1.61
CDKN3-201ENST00000216414 CYBBP04839 570 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 FOXO4P98177 505 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 CAP1Q01518 475 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 APOBRQ0VD83 1088 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 LRRFIP1Q32MZ4 808 aaKnown RBP5.01□□□□□ -1.61
CDKN3-201ENST00000216414 VWA3BQ502W6 1294 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 PAQR3Q6TCH7 311 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 HHIPL2Q6UWX4 724 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 FERMT3Q86UX7 667 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 CCDC144CPQ8IYA2 1237 aa5.01□□□□□ -1.61
CDKN3-201ENST00000216414 C7orf61Q8IZ16 206 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms