RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 RPN1P04843 607 aaKnown RBP17.83■□□□□ 0.44
SNAPC1-201ENST00000216294 SERPINB2P05120 415 aa17.83■□□□□ 0.44
SNAPC1-201ENST00000216294 SLC27A3Q5K4L6 730 aa17.83■□□□□ 0.44
SNAPC1-201ENST00000216294 UBR3Q6ZT12 1888 aa17.83■□□□□ 0.44
SNAPC1-201ENST00000216294 CNGA4Q8IV77 575 aa17.83■□□□□ 0.44
SNAPC1-201ENST00000216294 FERMT2Q96AC1 680 aa17.83■□□□□ 0.44
SNAPC1-201ENST00000216294 CALCOCO1Q9P1Z2 691 aa17.83■□□□□ 0.44
SNAPC1-201ENST00000216294 CCDC151A5D8V7 595 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 PROM2Q8N271 834 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 CTCFLQ8NI51 663 aaPredicted RBP17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 DUOX1Q9NRD9 1551 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 BRWD3Q6RI45 1802 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 LRRIQ3A6PVS8 624 aaPredicted RBP17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 TRIM66O15016 1216 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 SCG2P13521 617 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 NAPGQ99747 312 aaPredicted RBP17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 BRMS1Q9HCU9 246 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 AGPAT5Q9NUQ2 364 aa17.82■□□□□ 0.44
SNAPC1-201ENST00000216294 RCCD1A6NED2 376 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 MAP2K7O14733 419 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 ZNF185O15231 689 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 ATP1A1P05023 1023 aaKnown RBP17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 STAT6P42226 847 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 RIN2Q8WYP3 895 aaPredicted RBP17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 CCDC102AQ96A19 550 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 MYH10P35580 1976 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 USP17L3A6NCW0 530 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 USP17L4A6NCW7 530 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 PARP1P09874 1014 aaKnown RBP17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 CYP27A1Q02318 531 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 DDR1Q08345 913 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 ZSCAN26Q16670 478 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 INF2Q27J81 1249 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 USP17L1Q7RTZ2 530 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 SLC44A5Q8NCS7 719 aa17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 LIMA1Q9UHB6 759 aaKnown RBP17.81■□□□□ 0.44
SNAPC1-201ENST00000216294 TSPY2A6NKD2 308 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 TXNRD1Q16881 649 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 NAALADL2Q58DX5 795 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 TAF3Q5VWG9 929 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 MMS19Q96T76 1030 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 ANAPC4Q9UJX5 808 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 B4DLN1 442 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 SLC35G1Q2M3R5 365 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 FKBP15Q5T1M5 1219 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 SMCR8Q8TEV9 937 aaPredicted RBP17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 RWDD2AQ9UIY3 292 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 L1RE1Q9UN81 338 aa17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 EPN1Q9Y6I3 576 aaPredicted RBP17.8■□□□□ 0.44
SNAPC1-201ENST00000216294 CTAGE15A4D2H0 777 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 CTAGE8P0CG41 777 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 RCSD1Q6JBY9 416 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 WDR59Q6PJI9 974 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 CYP26C1Q6V0L0 522 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 CTAGE6Q86UF2 777 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 CTAGE4Q8IX94 777 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 CEP112Q8N8E3 955 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 NAA15Q9BXJ9 866 aaKnown RBP17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 MYO6Q9UM54 1294 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 GTPBP6O43824 516 aaPredicted RBP17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 NDUFA10O95299 355 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 HERVK_113P62684 666 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 GPSM2P81274 684 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 CASP8Q14790 479 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 TMTC1Q8IUR5 882 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 C4orf32Q8N8J7 132 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 LACRTQ9GZZ8 138 aa17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 PDS5AQ29RF7 1337 aaKnown RBP17.79■□□□□ 0.44
SNAPC1-201ENST00000216294 BRD3Q15059 726 aa17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 KCTD19Q17RG1 926 aaPredicted RBP17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 ZNF658Q5TYW1 1059 aaPredicted RBP17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 UIMC1Q96RL1 719 aa17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 MCM9Q9NXL9 1143 aa17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 DRC1Q96MC2 740 aa17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 IL17RBQ9NRM6 502 aa17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 TTF2Q9UNY4 1162 aaKnown RBP17.78■□□□□ 0.44
SNAPC1-201ENST00000216294 ATP8B1O43520 1251 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 PLEKP08567 350 aaPredicted RBP17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 TFAP4Q01664 338 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 PFKFB3Q16875 520 aaPredicted RBP17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 KRT26Q7Z3Y9 468 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 TRIM47Q96LD4 638 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 PSMB7Q99436 277 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 MACROD2A1Z1Q3 448 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 AMPD2Q01433 879 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 GRIK5Q16478 980 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 CCDC122Q5T0U0 273 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 HDXQ7Z353 690 aa17.77■□□□□ 0.44
SNAPC1-201ENST00000216294 HEATR3Q7Z4Q2 680 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms